Gene VIBHAR_00579 details

Gene Information

• Locus tag: VIBHAR_00579
• ID: 5554566
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 560777
• End bp: 561319
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640906074
• Product: hypothetical protein
• Protein accession: YP_001443808
• Protein GI: 156972901
• COG category: [S] Function unknown
• COG ID: [COG3078] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCGTA AAAAGAAATC AAGAAATCCG GGTGCCTCTG GCGCACCTGA GTTTGTCGTC 
ACTCGTAACC GTACAGAGTC AGATGTAGAA GGTCGTCTAC GCAAGCGTGC GAAAAAGCGC 
AAAGGTTTGA AGACTGGTAG CCGCAACTCT GATGCTGAAG AGCAGAAGAG ACAAGCAGCA 
GCACAGAAAC GCGATCCTCG CCTAGGCAGC AAGAAGAAAA TCCCTCTGAT TGTTGAACCG 
GTGAAGAAGC AAACTAAACA AGAGCGTCGT CTATCTGCAG AGCAAGAGCT GGAGATGCTA 
GAGAACGATG CGCAATTGAA CGTGTTGTTG GATCGCATCG AAGCGGGTGA GAATCTAGGC 
ACTGGTCTAC AAAAATACGT AGACGAGAAG CTAGATCGCA TCGAGAAGCT GATGGATCAA 
CTGGGTCTAC TAGAGCCGGA AGAAGACGAA GACTTCACTG CACCAGCGGT GAAAGGTTCT 
CGTAACGACG ATGATCTGTT AGCAGACTTC GACGATATCA ACTTCGACGA CTACAAAGGA 
TAA 

 

Protein sequence

MSRKKKSRNP GASGAPEFVV TRNRTESDVE GRLRKRAKKR KGLKTGSRNS DAEEQKRQAA 
AQKRDPRLGS KKKIPLIVEP VKKQTKQERR LSAEQELEML ENDAQLNVLL DRIEAGENLG 
TGLQKYVDEK LDRIEKLMDQ LGLLEPEEDE DFTAPAVKGS RNDDDLLADF DDINFDDYKG