Gene VIBHAR_00574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00574 
SymbolengB 
ID5554646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp557928 
End bp558599 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content45% 
IMG OID640906069 
Productribosome biogenesis GTP-binding protein YsxC 
Protein accessionYP_001443803 
Protein GI156972896 
COG category[R] General function prediction only 
COG ID[COG0218] Predicted GTPase 
TIGRFAM ID[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTAA CAGTGAGCGT AAAAATTCAT TACCAAAACA CGCATTTCAT CACCAGCGCA 
CCCGATATTC GTCACTTACC TGAGGACGAA GGTGTCGAAA TTGCGTTTGC AGGACGCTCA
AACGCTGGTA AATCGAGTGC ACTTAACCGT CTTACTAACC AAAAAAGCTT AGCGAAGACA
TCAAAGACAC CCGGTCGTAC TCAATTGATC AACCTTTTCA AAGTGGAAGA AGGTTGTCAC
ATTGTCGATT TGCCAGGATA CGGCTTCGCT CAAGTACCGG TTGAGATGAA GAACAAATGG
CAAAAATCAT TAGGTGAATA CCTACAGAAA CGCGAGTGCC TAAAAGGCTT GGTGGTTCTG
ATGGATATCC GTCACCCAAT GAAAGACCTC GATCAGCAAA TGATTTTCTG GGCAATCGAC
AGCCGCATCC CTGTTCAAGT TCTTCTGACT AAAGCAGACA AACTGAAAAG CGGTGCTCGC
AAACAAACGT TGCTAAAAAT TCGCAAACAA GTGGAAACAT TTGGTGGTGA CGTATCGGTA
GATGTTTTCT CTTCACTGAA AGGTCTAGGT GTCGATCAGC TTCGTGCCAA ACTGGACACT
TGGTTTGCAC CAGCATTTGC ACACTTGATT GAAGAAGACG AGCAAGACGT TCCAGAGAAC
GGCGAAGAAT AA
 
Protein sequence
MELTVSVKIH YQNTHFITSA PDIRHLPEDE GVEIAFAGRS NAGKSSALNR LTNQKSLAKT 
SKTPGRTQLI NLFKVEEGCH IVDLPGYGFA QVPVEMKNKW QKSLGEYLQK RECLKGLVVL
MDIRHPMKDL DQQMIFWAID SRIPVQVLLT KADKLKSGAR KQTLLKIRKQ VETFGGDVSV
DVFSSLKGLG VDQLRAKLDT WFAPAFAHLI EEDEQDVPEN GEE