| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00572 |
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| Symbol | |
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| ID | 5554723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 554377 |
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| End bp | 557169 |
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| Gene Length | 2793 bp |
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| Protein Length | 930 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640906067 |
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| Product | DNA polymerase I |
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| Protein accession | YP_001443802 |
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| Protein GI | 156972895 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGTA TTCCTGAAAA TCCGTTGATT CTGATCGACG GCTCTTCTTA TCTATATCGC
GCTTTTCACG CTTACCCAGG CACGATGAGT AACGGTGAAA TTCCAACTAA CGCAGTTTAC
GGTGTAGTAA ACATGTTACG CAGCATGATG CGTCAGTTTG CTTCTGATCG TATCGCAGTA
GTTTTCGATG CGAAGGGTAA AACCTTCCGT GACGATATGT ACCCGGAATA CAAAGCGAAT
CGTCCACCAA TGCCGGATGA TCTTCGTTGC CAGATTGAAC CTCTGCATAA CGTTATTCGT
GCTATGGGCC TGCCATTGAT CTGTATTCCA GGTGTAGAAG CCGATGACGT GATTGGTACT
CTGGCTTATC AAGCATCGCA GCAAGGCATG CCTGTTTTGA TCAGTACTGG CGATAAAGAT
ATGGCGCAGC TGGTGGATGA CAACGTTACC TTGATCAACA CCATGACCAA CGTCGTGATG
GATCGTGAAG GTGTGGTTGA GAAGTTTGGT ATCCCACCAG AATTGATCAT CGACTACCTA
GCGTTGATGG GCGATAAAGT CGATAACATT CCTGGTGTTC CGGGCGTGGG TGATAAAACC
GCAACTGCTC TGCTACAAGG TATTGGCGGT CTGACAAAGC TGTATGAAAA CCTCGATGAT
ATTGCAGCGC TTGGCTTCCG TGGTTCAAAA ACCATGGCGA AGAAGCTAGT CGATAACAAA
GACAACGCAA TGCTGTCTTA CGAGCTTGCG ACCATCAAGC TGGATGTGGA ACTGGAAGAG
ACGCCAGAAT CATTGCTAAA AGCAGAACCA AGCACCGATG AGCTGATCAA ACTGTACGGT
CAGTTGACGT TCAAGTCTTG GTTGAACGAG CTATTAGAAG GCGGTACAGG CGTGGTTGAA
GCGGATGAAT CAACTGGCGC AGCGCGTGGT GGTTCTGCTG CATCTAAAGC TGATATGGAT
ACTTCAGCGG TAAAAATAGA CCGTAGCCAA TACGAAACCA TCCTAGATGA AGCTTCATTC
AATGCTTGGT TAGACAAACT AAAAGCATCG GAGTTATTCG CGTTTGATAC CGAAACTGAC
AGCCTAGATT ACATGGTGGC AAACTTGGTT GGTTTGTCAT TTGCAACTGA CGAAGGCATT
GCTGCTTATG TACCAGTGGC CCACGACTAC CTAGATGCGC CGCAGCAGCT GGATCGTGAT
TGGGTACTGG CACAGCTAAA GCCGATTCTT GAAGATGAGG CTCAGGCGAA AGTTGGTCAA
AACCTAAAAT ACGATGCATC TGTGCTGGCT CGCTACGGCA TCGAGATGAA AGGCATCAAG
CATGACACCA TGTTGGCGTC TTACGTCTAC AACAGTGTAG GCGGCAAGCA TGATATGGAT
AGCTTGGCAC TGCGCTTCCT ACAGCACAGC TGCATTTCAT TCGAGCAAAT CGCAGGTAAA
GGTAAAAACC AACTGACCTT CAACCAAATC GATCTGGATG AAGCTTCACC ATATGCTGCA
GAAGATGCAG ACGTGACACT TCGTCTGCAT AACCGTTTGT TTGCTAACAT CGAACAAGAT
GAAAAGCTAA AAACTGTATA CGAAGAAATC GAAATGCCAC TTGTGCCCGT GCTGTCTCGC
ATTGAGCGTA CTGGTGTATT GATTGATGAC ATGAAGCTTA GCGCGCAATC TGTAGAAATT
GCTGCACGTC TGGACGAGCT TGAGCAAAAG GCGTACGAGA TTGCAGAACA AGAGTTCAAC
ATGAATTCTC CGAAGCAACT GCAAGCGCTT CTGTTTGAGA AAATGGGTCT ACCAGTTATC
AATAAGACGC CATCTGGCAC GCCTTCTACT AATGAAGAAG TGCTGCAAGA GCTGGCTCTG
GATTACCCAC TACCAAAACT GATTTTGGAA TACCGTGGTC TGGCGAAGCT AAAATCAACC
TACACCGACA AACTCCCGAA GATGATCAAC CCATCAACGG GTCGTGTGCA TACTTCTTAC
CACCAAGCGG TGACCGCAAC GGGTCGTCTA TCATCCACCG ATCCTAACTT GCAGAACATC
CCAATTCGTA ATGAAGAAGG TCGTCGTATT CGTCAGGCAT TCGTTGCCCC TACGGGTTAC
AAGATTCTGG CAGTCGACTA CTCTCAAATC GAATTGCGTA TTATGGCGCA CCTATCAGGT
GACCAAGCAC TGCTTGATGC GTTCCGTGAC GGTAAAGATA TCCACGCGGC AACCGCAGCA
GAAATCATGG GCGTTTCTAT TGAAGACGTT TCAAGTGAGC AACGTCGCCG TGCGAAAGCG
GTTAACTTCG GTCTTATCTA CGGCATGAGT GCGTTTGGTT TGGCGAAGCA ACTGGGCATT
CCTCGTGGTG AGGCACAAGC GTACATGGAC AAGTATTTCG AGCGCTACCC AGGCGTAATG
CAGTACATGG AAGACACGCG CAGTGCGGCT TCAGAGCAAG GTTTCGTCGA GACAATCTTT
GGTCGTCGCT TGCACCTTCC TGAAATTCAA TCTCGCAACG GCATGCGTCG TAAGGCGGCA
GAGCGTGCAG CGATCAACGC GCCGATGCAA GGCACCGCTG CGGACATCAT CAAGAAAGCG
ATGCTGTTAG TTGATCAGTG GATTCAAGAA GAAGGCAATG GTCGAGTGAA ACTTCTGATG
CAAGTACACG ATGAACTGGT GTTTGAAGTT GAAGAGTCGT CTTTGTCCGA AATTGAAAGT
AAAGTACAGA ATTTGATGGA ATCTGCAGCA GAGCTAAAAG TGCCTCTAGT GGCAGAAGCG
GGTCACGGTG ACAACTGGGA TCAAGCACAC TAG
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| Protein sequence | MASIPENPLI LIDGSSYLYR AFHAYPGTMS NGEIPTNAVY GVVNMLRSMM RQFASDRIAV
VFDAKGKTFR DDMYPEYKAN RPPMPDDLRC QIEPLHNVIR AMGLPLICIP GVEADDVIGT
LAYQASQQGM PVLISTGDKD MAQLVDDNVT LINTMTNVVM DREGVVEKFG IPPELIIDYL
ALMGDKVDNI PGVPGVGDKT ATALLQGIGG LTKLYENLDD IAALGFRGSK TMAKKLVDNK
DNAMLSYELA TIKLDVELEE TPESLLKAEP STDELIKLYG QLTFKSWLNE LLEGGTGVVE
ADESTGAARG GSAASKADMD TSAVKIDRSQ YETILDEASF NAWLDKLKAS ELFAFDTETD
SLDYMVANLV GLSFATDEGI AAYVPVAHDY LDAPQQLDRD WVLAQLKPIL EDEAQAKVGQ
NLKYDASVLA RYGIEMKGIK HDTMLASYVY NSVGGKHDMD SLALRFLQHS CISFEQIAGK
GKNQLTFNQI DLDEASPYAA EDADVTLRLH NRLFANIEQD EKLKTVYEEI EMPLVPVLSR
IERTGVLIDD MKLSAQSVEI AARLDELEQK AYEIAEQEFN MNSPKQLQAL LFEKMGLPVI
NKTPSGTPST NEEVLQELAL DYPLPKLILE YRGLAKLKST YTDKLPKMIN PSTGRVHTSY
HQAVTATGRL SSTDPNLQNI PIRNEEGRRI RQAFVAPTGY KILAVDYSQI ELRIMAHLSG
DQALLDAFRD GKDIHAATAA EIMGVSIEDV SSEQRRRAKA VNFGLIYGMS AFGLAKQLGI
PRGEAQAYMD KYFERYPGVM QYMEDTRSAA SEQGFVETIF GRRLHLPEIQ SRNGMRRKAA
ERAAINAPMQ GTAADIIKKA MLLVDQWIQE EGNGRVKLLM QVHDELVFEV EESSLSEIES
KVQNLMESAA ELKVPLVAEA GHGDNWDQAH
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