Gene VIBHAR_00563 details

Gene Information

• Locus tag: VIBHAR_00563
• ID: 5556296
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 546814
• End bp: 547449
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640906058
• Product: hypothetical protein
• Protein accession: YP_001443793
• Protein GI: 156972886
• COG category: [S] Function unknown
• COG ID: [COG3165] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCATTTG AACCTCTTAT CACTGCCGTT ATTGAAACGA CGCTAAATAC GCTGATTAAA 
GACGATCCTG AATTGGGTCG TCGTTTGTCA CGTCTTAAAG GTCAGGTGAT TCAAATTCAC 
CTCAAAGAAA TCAACAAGAC ATTGACGTTC ATCTTCAGCC AGCAAATCGA TGTTTTAGGT 
AATTACGAAG GTCAGCCAGA CTGTTATTTG TCACTGAATC TAAGCGTGTT GCCTGAGTTG 
CGCGATCAAG CCAACATCAC TCGCCTGATT AAGCAAGATA AACTTGAGCT TGAAGGTGAC 
ATTCAATTGG CACAGAAATT CTCTCAATTG ATGGTGGATT GCAAACCTGA TATCGAAGAA 
TGGTTGTCTC GCGTGACAGG TGATGTCGTG GCACATACCT TTGTGCAAGG CACCAAAAAC 
GTCGGTGGTT TCTTTGCCTC TCAAGCAGAA AAACACCAAC GTCATCTTGC TCAAGTGGTA 
ACAGAAGAGT GGAAACTGGC GCCAGCACCG CTGGAAATCG CCCACTTCTG TGATCAAGTG 
GATGACGTTC GCAGTCAAGC TTCTCGTGTT GAAGCGCGCC TAAACGCACT ACTAAACAAG 
TTCGACTCGG ATAAGCCTGC GCTGGAGAAC TCATGA 

 

Protein sequence

MPFEPLITAV IETTLNTLIK DDPELGRRLS RLKGQVIQIH LKEINKTLTF IFSQQIDVLG 
NYEGQPDCYL SLNLSVLPEL RDQANITRLI KQDKLELEGD IQLAQKFSQL MVDCKPDIEE 
WLSRVTGDVV AHTFVQGTKN VGGFFASQAE KHQRHLAQVV TEEWKLAPAP LEIAHFCDQV 
DDVRSQASRV EARLNALLNK FDSDKPALEN S