Gene VIBHAR_00561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00561 
Symbol 
ID5554437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp544412 
End bp545944 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content48% 
IMG OID640906056 
Producthypothetical protein 
Protein accessionYP_001443791 
Protein GI156972884 
COG category[S] Function unknown 
COG ID[COG1322] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATGGA TTCTTGAGCA TCAATCTCTC ATTCTGTCTT CTCTTTTTAC CGCGACCATC 
AGCGGTGTTG CAGTGGGTTG GTGGGTCAAA CAACGCTTTG CCACGCAAAC TCAGTTGCTC
GAACAACAAC TCTCTTCTGA AAAACAGCTT CATCAACAAC AACTTGAGCA AGTGAAGCAA
AACCTCTCCG ATGCGCAGCA GGAATTGGAT GAGCTCGATG ATGAACGCGA TAAAGCGGCA
TTCGAGGTGC GCCAAACTCA TGGTAAATTG ATGGCGGCGA TGGAAAAACT GCGCTATTTC
GAAGCCGTGA AGCAAGAGCG TCAGCAGTAT TTTGATGAGC TAGGTCAGAT GCGTGAACAC
AAATCGCGCC TTGAAACTCA GCTTCGTGAA CAGCAAGCGC GCCACGAGCA AATCAACCAA
GCCAATGCGG AAAAACTGCA AATTCTTGAG CAAGCAGAAA CGCGTTTGAA GCAGCAATTT
GAGCACTTAG CGAATCAGTT GTTTGAAGAG AAAACCGCCA AAGTCGACAT GCAAAACCGC
CAGAGTTTGG AAGGTTTGCT GTCTCCACTG AAAGAGCAGT TAGAAGGGTT CAAAAAACAA
GTTAACGACA GCTTCAGCCA AGAAGCCAAA GAGCGTCACA CCTTGGTGCA TGAGTTGAAG
AACCTGCAAC GTTTGAATGA GCATATGACC AGAGAAGCGG TCAATCTGAC TCAAGCTTTG
AAAGGTGACA ACAAACAGCA GGGCAACTGG GGTGAAGTGG TTTTGGCTCG TGTCTTGGCA
GAATCTGGCT TACGTGAAGG GCACGAGTAT CAAACTCAGG TGAGCTTGCA AAACGAAGCC
GGCAAACGCT ATCAACCGGA TGTGATTGTT CACTTACCGC AAAACAAACA AGTGGTGGTC
GATTCGAAAA TGGCGTTAGT GGCGTACGAG CGCTACTTCA ACGCAGAGAA CGACATTCAA
CGTGAACAGG CGCTGAGCGA TCACTTAGCC GCGCTGCGCG CGCACATCAA AGGCTTGAGT
CTTAAGGATT ACCACCAGTT AAAAGGCATA CAGAGCTTAG ATTATGTGTT GATGTTTATT
CCGGTAGAGC CGGCATTCCA AGTTGCGATT CAAGCTGACC CAAGCTTGGT TAAAGATGCA
ATGGAACAAA ACATTATTTT GGTCAGCCCG ACCACTTTGC TGGTGGCGCT ACGTACGATA
GATAACTTGT GGCGTAACGA ACGCCAAAAC GAAAACGCCC AATTGATCGC TGAACGTGCT
GCGAAGCTGT ATGACAAACT GCGCTTGTTT GTAGACGATA TGGAAGGGCT TGGCGGCGCA
TTAGACAAAG CCAACCAAAC GTACCAAGGG GCGATGAATA AGTTGGCGAC AGGGCGTGGC
AACGTGATCC GTCAGGCGGA GAGCTTTAAG CAACTTGGTG TTGAGGTAAA ACGTCCTATT
TCTCCTGACC TTGCTCAGTT GGCGCAGACG GAGTCATTTT CGGAAAATGC TTCTTTAGTA
GAAAGACATC CGGCTGAGGA TAAAGTAAAC TAA
 
Protein sequence
MQWILEHQSL ILSSLFTATI SGVAVGWWVK QRFATQTQLL EQQLSSEKQL HQQQLEQVKQ 
NLSDAQQELD ELDDERDKAA FEVRQTHGKL MAAMEKLRYF EAVKQERQQY FDELGQMREH
KSRLETQLRE QQARHEQINQ ANAEKLQILE QAETRLKQQF EHLANQLFEE KTAKVDMQNR
QSLEGLLSPL KEQLEGFKKQ VNDSFSQEAK ERHTLVHELK NLQRLNEHMT REAVNLTQAL
KGDNKQQGNW GEVVLARVLA ESGLREGHEY QTQVSLQNEA GKRYQPDVIV HLPQNKQVVV
DSKMALVAYE RYFNAENDIQ REQALSDHLA ALRAHIKGLS LKDYHQLKGI QSLDYVLMFI
PVEPAFQVAI QADPSLVKDA MEQNIILVSP TTLLVALRTI DNLWRNERQN ENAQLIAERA
AKLYDKLRLF VDDMEGLGGA LDKANQTYQG AMNKLATGRG NVIRQAESFK QLGVEVKRPI
SPDLAQLAQT ESFSENASLV ERHPAEDKVN