Gene VIBHAR_00557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00557 
Symbol 
ID5554306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp538392 
End bp539141 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content40% 
IMG OID640906052 
Producttransposase 
Protein accessionYP_001443787 
Protein GI156972880 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAACTG ATATTCGATG GGAACTGCTA CTTCAAATTA TGAAAAGTAC AGGTCGTATT 
TACGATAAAA CTGAACATCG AATGACATTT GAAGGAATAC TTTATCGAAT GAGAACAGGT
ATTCCTTGGC GAGATCTACC CTCTGAGTTC GGAGAGTGGA GTACCGTTTA CAGACGATTT
AATCTTTGGT CAAAGAAAGG GGTTTTAGAT AAGCTTTTCA GAAGCTTATC TAGCATGGCT
GATTTTGAAT GGGTCTTTCT TGACGGCTCT ATAGTTCGAG CGCACCAGCA TAGTACAGGC
GCAACTACTG AAAGCTCAGA GCAAATAGGA AAAAGTTGCG GGGGCAACTC AACCAAAATT
CACTTAGCTG TGGATAGTGG TGGCTTACCG ATTTGCTTTG ATTTATCAGA AGGCCAACGC
CACGATATAT TGCATGCCAA AAGCTTAGTT GAACAACTCG ATGAAGTTAA TACCATCGTT
TGTGATAAAG GATATGACAG CGAAGCTTTC CGTACTTTTG TTAAGGAACA TGGCGGAGAA
ACGGTAATTG CTAAACGCAA TTATGGGCAA GATATAGACA AAACCAGTAT GGATTGGTGT
CTATACAAGT ATCGTCATCT GGTTGAAAAT GCCTTTGCGA GAATTAAGCA TTATCGAGCT
ATTTCAAGTA GATATGACAA GTTAGAAAGG AATTATGCCA GCATGTTATC GCTGGCATTC
ATGTTAATGT GGTTACCGAT GTATTGCTGA
 
Protein sequence
MLTDIRWELL LQIMKSTGRI YDKTEHRMTF EGILYRMRTG IPWRDLPSEF GEWSTVYRRF 
NLWSKKGVLD KLFRSLSSMA DFEWVFLDGS IVRAHQHSTG ATTESSEQIG KSCGGNSTKI
HLAVDSGGLP ICFDLSEGQR HDILHAKSLV EQLDEVNTIV CDKGYDSEAF RTFVKEHGGE
TVIAKRNYGQ DIDKTSMDWC LYKYRHLVEN AFARIKHYRA ISSRYDKLER NYASMLSLAF
MLMWLPMYC