Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00557 |
Symbol | |
ID | 5554306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 538392 |
End bp | 539141 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640906052 |
Product | transposase |
Protein accession | YP_001443787 |
Protein GI | 156972880 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAACTG ATATTCGATG GGAACTGCTA CTTCAAATTA TGAAAAGTAC AGGTCGTATT TACGATAAAA CTGAACATCG AATGACATTT GAAGGAATAC TTTATCGAAT GAGAACAGGT ATTCCTTGGC GAGATCTACC CTCTGAGTTC GGAGAGTGGA GTACCGTTTA CAGACGATTT AATCTTTGGT CAAAGAAAGG GGTTTTAGAT AAGCTTTTCA GAAGCTTATC TAGCATGGCT GATTTTGAAT GGGTCTTTCT TGACGGCTCT ATAGTTCGAG CGCACCAGCA TAGTACAGGC GCAACTACTG AAAGCTCAGA GCAAATAGGA AAAAGTTGCG GGGGCAACTC AACCAAAATT CACTTAGCTG TGGATAGTGG TGGCTTACCG ATTTGCTTTG ATTTATCAGA AGGCCAACGC CACGATATAT TGCATGCCAA AAGCTTAGTT GAACAACTCG ATGAAGTTAA TACCATCGTT TGTGATAAAG GATATGACAG CGAAGCTTTC CGTACTTTTG TTAAGGAACA TGGCGGAGAA ACGGTAATTG CTAAACGCAA TTATGGGCAA GATATAGACA AAACCAGTAT GGATTGGTGT CTATACAAGT ATCGTCATCT GGTTGAAAAT GCCTTTGCGA GAATTAAGCA TTATCGAGCT ATTTCAAGTA GATATGACAA GTTAGAAAGG AATTATGCCA GCATGTTATC GCTGGCATTC ATGTTAATGT GGTTACCGAT GTATTGCTGA
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Protein sequence | MLTDIRWELL LQIMKSTGRI YDKTEHRMTF EGILYRMRTG IPWRDLPSEF GEWSTVYRRF NLWSKKGVLD KLFRSLSSMA DFEWVFLDGS IVRAHQHSTG ATTESSEQIG KSCGGNSTKI HLAVDSGGLP ICFDLSEGQR HDILHAKSLV EQLDEVNTIV CDKGYDSEAF RTFVKEHGGE TVIAKRNYGQ DIDKTSMDWC LYKYRHLVEN AFARIKHYRA ISSRYDKLER NYASMLSLAF MLMWLPMYC
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