Gene VIBHAR_00540 details

Gene Information

• Locus tag: VIBHAR_00540
• ID: 5556338
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 520499
• End bp: 521293
• Gene Length: 795 bp
• Protein Length: 264 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640906035
• Product: transposase
• Protein accession: YP_001443770
• Protein GI: 156972863

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTGGTTC AGGCGGATGA AACGCCGCTC AATGTCCTTA AAGAAGATAA AAAGTGTTAT 
ATGTGGATCT ACTGCTCGGG CGCAGACTCG CCCGACGCTG CACTGCCGAA TGTAAAGAAT 
ATCGCCTTGT ACGACTATCA AAACAGTCGC GCGAGGGTAT GCCCTGTTGC CTTCTTGGGG 
GATTACAGTG GTTATCTGCA AACCGATGGC TATGGTGCCT ATGATGGTCT TCATCACGTA 
ACCAATGTGG GTTGCTTGGC GCATGCACGG CGTAAGTTCA TGGATGCTAA GAAGCTTCAA 
GGTAAAGGTA AGTCAGGCAA AGCAGATAAA GCGCTGGCCA AAATCCAGAA GCTCTATGGG 
ATAGAATCGT GCTTAAAAGG TGCGACTGTC GAAACACGAA AAGCAGAACG TCAACTGCAT 
GCCAAGCCGA TACTGGATGA GCTGTACGAG TGGATGACGA CTCAACAAGT GCTATCGTCT 
AGCTCGCTGG GCAAGGCGAT AAAATACACG CTCGGCCAAT GGCCGAAACT TATCCGCTAT 
ATCGATGACG GTCATTTATC TATCGATAAT AATCGTGCTG AACGTGCCAT TAAACCGCTG 
GTCATTGGCA GAAAAAATTG GCTCTTCTCG AACACACCAA ATGGTGCTGA TGCGAGCGCG 
ATGCTTTACA GCATCGTCGA GACGGCGAAA GCCAACGGCC TTATCCTCTA CGACTACATG 
GTCAAGTGCA TGAAAGAGCT CGCGAAAGCG GAGCCTGATA TCGATGCGCT CCTACCTTGG 
AACTTCAAAT ATTAA 

 

Protein sequence

MVVQADETPL NVLKEDKKCY MWIYCSGADS PDAALPNVKN IALYDYQNSR ARVCPVAFLG 
DYSGYLQTDG YGAYDGLHHV TNVGCLAHAR RKFMDAKKLQ GKGKSGKADK ALAKIQKLYG 
IESCLKGATV ETRKAERQLH AKPILDELYE WMTTQQVLSS SSLGKAIKYT LGQWPKLIRY 
IDDGHLSIDN NRAERAIKPL VIGRKNWLFS NTPNGADASA MLYSIVETAK ANGLILYDYM 
VKCMKELAKA EPDIDALLPW NFKY