Gene VIBHAR_00539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00539 
Symbol 
ID5556382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp518735 
End bp520162 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content39% 
IMG OID640906034 
Producthypothetical protein 
Protein accessionYP_001443769 
Protein GI156972862 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACAT CTAAACTCTA TTTACCCGAT TTTCCTCAGC AGCATAAGGT CAAGGATGTT 
GATGTGGTCA CGCTCTACCA TGAGAGAAGA TTTGAAGAGT TGGATGCCGT CGTCGTTTGC
AAGGATAAAG ACGGTCACGT TACCGCCACC TTCGAGCAAA ACAATTGGGA TTGCTTACCT
TTCTCTCGAA GGAAATGTTA CAACAACCTA AATTTTGAGG AATTTAACAG TTTCCCTACG
TTACAGCGGG AACTTAAATT ACTAAGTTTT GGCTGGCTAT TTAATAAGAG CCCGAAACAG
AAGAAAGCAA TAAAATTCTC AAGTGTGCGA ACTCGATTAG ATAATATGAA GGTGGGTTAT
AGATTCTTAC AAGAGAACAA CCATAATTCA TTGGAATGCC TTTCTTCATC AATGGTATGG
GTTGAATTCG AACGCTTTTT ACAGAAAGGG AGCTATGCCC AAGGAACTAT TGAGTCAATA
TTTGTGGCAA TAAATACGGC TATAAATGAT GAGTCATGGC ATAAACTTAA TCTGGGCATC
ACACCGATAA AATCAAATAT TGAAGCGACA CGTATAAGTT TCCACGAAGC ACAGCAAACC
CTTGTGATAC CTGAACGTCT ATGTGATTCC ATTTATGGAA AAGCAATGAA ACTGGTAAAT
CATGCTCATA CACATAGGCA ACTAATTTTA GATACCGAAA ATACCTTACA GAAAAACTAT
ATCGAGGGTG TTCGGAACCT TGAGAAAAAA ATTAAGCAAG GTAAACATTA CTCATTTATG
AATGAAGACG GGAGCATTGA TACCGACAAA TTTTTCTCAA CCGCACAAGA GTGCCAGCCT
CTTAAAGTTA AGAACATTAT TGTGCCTCTA GCGATGAAGG TGCCACATAC CAAATTAGAA
ACAGGGCACG ACTTTAGGCG TTATTTAACG CAGTTAATAA ATGCTTGCTA TATCATTTGT
GGGGGATTTA GCGGTATGCG AGACTCTGAA ATCGATAAAT TAACGCCTAA AAGTTATTAC
AAAGATTCTT TTGAAGGTCG TGATTTCCAC ATGCTGCAAT CCCATACCTT TAAGTTAGGT
AACCAACGAG AAACATGGGT AACAGCTCCT TCTTCTAAAA TTGCGATAGA GTTAATGTCA
ACCCTAACAG AAGAGTGGCG CAAAGAAGTA GTCTACCCAG ACAAAAAATA CAAAGACTCC
ATTTGGGTAT ATAGAGCAAA TCGTTCTAAA CCTCCCACCT TGATTACAGG ATGGAATAAG
CGACTACAGA GATTTTGCAA ACAGTTTAAC TTCATCGTAA CTGAAGAAGA TTTCGTAGAA
TGTTTTGAGT CAAACCCTCG CTCATTAAAC CGTGTGAAAA AAGATGTAAC GGTTGGAAGT
CCGTGGCACA TAACAACTCA TCAGTTTACA ACACCACCTA AACGATAA
 
Protein sequence
MDTSKLYLPD FPQQHKVKDV DVVTLYHERR FEELDAVVVC KDKDGHVTAT FEQNNWDCLP 
FSRRKCYNNL NFEEFNSFPT LQRELKLLSF GWLFNKSPKQ KKAIKFSSVR TRLDNMKVGY
RFLQENNHNS LECLSSSMVW VEFERFLQKG SYAQGTIESI FVAINTAIND ESWHKLNLGI
TPIKSNIEAT RISFHEAQQT LVIPERLCDS IYGKAMKLVN HAHTHRQLIL DTENTLQKNY
IEGVRNLEKK IKQGKHYSFM NEDGSIDTDK FFSTAQECQP LKVKNIIVPL AMKVPHTKLE
TGHDFRRYLT QLINACYIIC GGFSGMRDSE IDKLTPKSYY KDSFEGRDFH MLQSHTFKLG
NQRETWVTAP SSKIAIELMS TLTEEWRKEV VYPDKKYKDS IWVYRANRSK PPTLITGWNK
RLQRFCKQFN FIVTEEDFVE CFESNPRSLN RVKKDVTVGS PWHITTHQFT TPPKR