| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00528 |
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| Symbol | |
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| ID | 5552902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 506592 |
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| End bp | 509741 |
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| Gene Length | 3150 bp |
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| Protein Length | 1049 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640906023 |
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| Product | hypothetical protein |
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| Protein accession | YP_001443758 |
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| Protein GI | 156972851 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCACTTT TTCTGTTTTT CATAGCGCTT ATTTTCAGTG CTGTCGCCAC GGCGCAAGAA
CAAAAAGTCC TCGTTGTTCA CTCTTACCAT CAAGGTTTTT TTTGGACCGA TTCTATTCAA
CGTGGTTTCG CCCGGCAACT TGAGGGGCAC CCGCTTGATA TCCGTATTCT GTATCTTGAT
TCTAAGCGCA GTCAGAGCCA GCAATTCTTC AATCAGTTGG AATCCCTTTA TCGTACTAAA
CTGAGTGAAG AGCATTTCGA CGCGATCGTC GTCAGTGATA ACAACGCACT CGCTTTAATG
CAACGTCTGT CAGACGTGCT AGATAATACT CCTGTCATTT TCAGTGGCAT CAACAATTAC
GATCCCTCTT TGCATAAGGG ATTGAGAGCC ACAGGCGTGA TTGAAGATGT GGACTTGTTT
GCAAACCTTG CTCTTATCGA GCGATTGCAT CCCAAGCACA AGCAGGTTCT TGTCGTCAGT
GACCATTCTG TTACTGGTGC GGCACTTCGT GCTAAGATCG AGAATTTTCT CGATAATAAT
CCTATATATC GCGATAAAGT TCGCCACTTC ATTCCTGACA GTGTTGAAAC GTTAAAGCAA
AAAGTGTCGA AAATGAACAT CGATAACGTA GTGTTGTTCT GGACTTACTA TCGAGATATC
CATGGCAATA TCGCGACCGA TAAAGATTGG CGTGATATCA ACCAAGCCTC CAATGCTCCT
GTATTTATGG TGCATGATGT TGGGGTTGGT GGTGTTATTC AAAGCGGTTA CCGCCAAGGT
TTTGAGGCGG CGAAGTTGCT GACGCAAGTC CTCGATAACC CAGCACAGCC TTTGCCTGCG
GTGGTGAGTG CAGAGTCGGA CATCAAACTC GATTATCAAT CGGTGGTGCG TTGGGGCTTA
GGAGCAGAGC AAGAAGCCTC ATCGGCATTC TTCAATAAGC CCGCAGAGTT TACTGAGCGG
TACGCACGAG AAATCAAACT GTTTGGCAGT GTTTTGGTGG CGATGACCAT CATTATTTTG
CTGCTCAGCT ACTATTTACA GCGAATTCGT CGCAGTGAGA GCATCGCCCG TGAAAGCCAA
GCGATTTTAG AGTCGGTTTT TGACCAGAGT ATGCAGTACA TGGGTATTCT CGACCAACAT
GGTTTGCTCA AATCAGGTAA CGATCGTCTG CAATCTTTAT TTAATCGTCA AGAAATGCGT
GTCGATCGTC CACTTTGGCA TCACAAAGAC TGGAGTGAGG AAGCGCGCCA ATTACTCGCC
AGCTATTTTC ACTCTAGTCA TCGCCAAATG GCCACTTTTG AGGCTGAAAT CTGGAACAAG
GAACACGGTG CTATGGTGCT GGAAGTGTCT CTCAAACCGT TTTCACAACA AGTGGCGAAC
CAAGAGCAAT ATTTGTTTGA AGCTCGCGAT ATCACCAGCC GTAAAGCGAT GGAAGACAAG
CTCTATCATC GCGAATCAAG TCTGCGTAAT TACTATGAGC AGCAGCCTGT GATGATGGTG
ACACTCGATA GCAATAACCG CGTGCAAGAG GTGAATCACT TTGCTCAGCA GCTTTTAGGC
TATCAACCGT TGGATATGCT GGGGCATTAC TTATATTCAT TCTACTGCGA TGAAAAAGCA
CTCTATCCAC GCCAAGTTTT GTTGCAGCCA CAGCAGGTGA TGAACGGGGT TTGGCGTCGA
GAAATCGAAT ATCGTCATGC CGATGGTCAT AGCGTATGGG TACGTGAAAA CATTCGCCCA
TTAAGAGATT CCGACCAATT GTTGATCGTT GGGGAAGACA TCACCGAGAC AAAGAAGCTC
GCCAAGCAGC TCGAATATCA AGCGCGCTAC GACTTACTGA CCGATACCTA CAATCGCAAC
TACTTCGAGC TAGAGCTGCA AACGGCGCTG AGAGAAGTAG AAAGCCACCG TCGAGTGCAT
GCGATGTTGT ACCTCGATCT TGATCAACTC AAAGTACTCA ACGACACAGT AGGCCACGAT
GCGGGTGATG CCGCGATCCA GTTCTGTGCC AGCATGTTAG AGGAAGTCTT GCCATACAAC
GCGGTATTGG CGCGCATGGG CGGTGATGAA TTTGCGGTGT TATTGAAAGA CTGCGATGAG
CACGGCGCGA TTAATATTGC TAAGCAGATC ATCTCTACGT TGGGTGAGCA GATTTTCCGT
TGGGAAGACA CGCAACTGTT TATGAGCTGC TCGGTGGGCG TTCGCATCAT CGACCATACG
GCAGAGACGC CACAAATGGT GCATGCTCAG GCGGACTCGG CTTGCCATGC GGCGAAAGAG
CAGGGGCGTA ACCGCTATAA CTTGTTTAGC TTGGACAACG AAGAGTTGCG ACACCGCCAG
TTGGAGATGC AAAGCGTTAA TTTGGTGCAT GAGGCGCTAT CGAGTAAGCG TCTTGAACTG
TTTGCTCAGC GTATTTTGAA TTTGAGTGGT GAAGGTTCAC CATTGTGTTT TGAGATTTTG
GTGCGTATTC GCAATGCTCA AGGCAACTAC TTATCCCCCG GCGTCTTTGT CCCTGCCGCT
GAGCGTTACA ACATTGCTCA CTGGATTGAT AAACAAGTGA TTAGCCAAAC TTTAGAGTGG
TTTGAAGCGC GTCCAGAAGT CGTGGAGCAG CTCGGTCGCT GTGCGATTAA CTTGTCTGGT
CAATCAATGG GTAACCAAGA GTTTATCGAC TTCCTTCTAG CACGTTTGCA GTCGTCTTCG
ATTCCTTGTG AAAAAATCTG TCTAGAAATC ACTGAAACGG CAGCGATGAG CAACATCGAT
CAAGCGCTCG ACTTCTTCAC TCGTGTTAAA GCGCTGGGAT GCTTGATTGC GTTGGATGAT
TTTGGCTCCG GTTTATCGTC TTTTGGCTAC TTAAAGAAAC TTCCTGTCGA TATCGTGAAA
ATTGATGGCC TTTTCGTGCG AGATATCAAC GTAAACGAGA TGGATCGCGT GATGGTGCGG
TCAATTAACG ATTTAGCCAA GCAAATGGGT AAAGTCACGG TGGCAGAGTT TGTTGAGAAT
GACCAAGTTA GAGCGTGTTT GGTCGATCTT GGCGTCGACT ATGGCCAAGG TTATGGCATC
GGTCATCCTA AGCCTCTGGC TGAGCTAGTC AACGAACTCC AACAACTTGA GCCCAAGAGT
AGAAAGTCAT CTAACTTATC CCCAGCCTAG
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| Protein sequence | MPLFLFFIAL IFSAVATAQE QKVLVVHSYH QGFFWTDSIQ RGFARQLEGH PLDIRILYLD
SKRSQSQQFF NQLESLYRTK LSEEHFDAIV VSDNNALALM QRLSDVLDNT PVIFSGINNY
DPSLHKGLRA TGVIEDVDLF ANLALIERLH PKHKQVLVVS DHSVTGAALR AKIENFLDNN
PIYRDKVRHF IPDSVETLKQ KVSKMNIDNV VLFWTYYRDI HGNIATDKDW RDINQASNAP
VFMVHDVGVG GVIQSGYRQG FEAAKLLTQV LDNPAQPLPA VVSAESDIKL DYQSVVRWGL
GAEQEASSAF FNKPAEFTER YAREIKLFGS VLVAMTIIIL LLSYYLQRIR RSESIARESQ
AILESVFDQS MQYMGILDQH GLLKSGNDRL QSLFNRQEMR VDRPLWHHKD WSEEARQLLA
SYFHSSHRQM ATFEAEIWNK EHGAMVLEVS LKPFSQQVAN QEQYLFEARD ITSRKAMEDK
LYHRESSLRN YYEQQPVMMV TLDSNNRVQE VNHFAQQLLG YQPLDMLGHY LYSFYCDEKA
LYPRQVLLQP QQVMNGVWRR EIEYRHADGH SVWVRENIRP LRDSDQLLIV GEDITETKKL
AKQLEYQARY DLLTDTYNRN YFELELQTAL REVESHRRVH AMLYLDLDQL KVLNDTVGHD
AGDAAIQFCA SMLEEVLPYN AVLARMGGDE FAVLLKDCDE HGAINIAKQI ISTLGEQIFR
WEDTQLFMSC SVGVRIIDHT AETPQMVHAQ ADSACHAAKE QGRNRYNLFS LDNEELRHRQ
LEMQSVNLVH EALSSKRLEL FAQRILNLSG EGSPLCFEIL VRIRNAQGNY LSPGVFVPAA
ERYNIAHWID KQVISQTLEW FEARPEVVEQ LGRCAINLSG QSMGNQEFID FLLARLQSSS
IPCEKICLEI TETAAMSNID QALDFFTRVK ALGCLIALDD FGSGLSSFGY LKKLPVDIVK
IDGLFVRDIN VNEMDRVMVR SINDLAKQMG KVTVAEFVEN DQVRACLVDL GVDYGQGYGI
GHPKPLAELV NELQQLEPKS RKSSNLSPA
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