| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00526 |
|---|
| Symbol | |
|---|
| ID | 5552945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 503839 |
|---|
| End bp | 505926 |
|---|
| Gene Length | 2088 bp |
|---|
| Protein Length | 695 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640906021 |
|---|
| Product | Zn-dependent oligopeptidase |
|---|
| Protein accession | YP_001443756 |
|---|
| Protein GI | 156972849 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0339] Zn-dependent oligopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAATAG GCAAATACAG AGCCAAAACA CAAAAGGAAT TATTCATGTC TAATCCACTT
CTTACGTTTA CGGATCTTCC TCCGTTTTCG CAAATCAAAC CAGAACACAT TAAACCTGCA
GTGGAGCAGG CGATTGCGGA TTGTCGTGCC AAAATTGACG AGGTACTAAA AGACAACGCA
AACCCAAGCT GGACCAGTGT GATCGCGCCA ATTGAAGAAG CGGATGACCG CTTGAGCCGC
ATTTGGTCAC CAGTGGGTCA TATGAACTCA GTAGTGAACA GCGAAGAACT TCGCGAAGCT
TACGAAAGCT GCCTACCAAT CCTGTCTGAG TACGGTACTT GGGTTGGTCA GCACAAAGGT
CTTTACGAAG CGCACAAAGC GATCAAAGCA AGCGAAGAGT ACGCGACGCT AACGCGTGCA
CAACAGAAGA CCATTTCGGA TTCACTACGC GACTTCGAGC TTTCGGGCAT TGGTCTACCA
TCAGACGAGC AACATCGCTA CGGCGAAATC AGCAAGCGCA TGTCTGAGCT GAGCTCAAAA
TTCTCTAACA ATGTGCTGGA TGCAACCATG GGTTGGACTA AGCACGTTGC CGACGAAAAA
GACCTAGCGG GTATGCCAGA ATCTGCACTT GCAGCGGCAA AAGCGGCAGC AGAAGCAAAA
GAGCTGGATG GCTACCTCAT CACGCTAGAT ATCCCATCTT ACCTACCAGT TATGACGTAC
TGTGATAACC AAGACCTACG TAAAGAAGTG TACGAAGCGT ACGTAACGCG CGCCTCTGAG
CGTGGTCCAA ACGCAGGTAA ATGGGACAAC TCAGAAATCA TCACTGAGCA GCTAAAACTG
CGTCATGAAA TCTCTCGTAT GCTGGGTTTC AACACTTACA GTGAGAAATC TCTGGCAACT
AAAATGGCAG AGAACCCAGC GCAAGTTCTT GGCTTCTTGA ACGATTTGGC GACCAAAGCG
AAACCACAGG GTGAGCGCGA AATCGAAGAG CTACGCCAGT TTGCGAATGT GGAATTTGGT
GTCAGCGAGC TAAACGTATG GGACATCGCG TACTACAGCG AGAAGCAAAA GCAGCACTTG
TTCCAAATTT CGGATGAAGA ACTTCGTCCT TACTTCCCTG AATCAAAAGC AGTAAGTGGT
CTGTTTGAAG TGCTAAACCG CGTGTTTGGT ATGACAGTGA CAGAGCGTGA AGGCGTGGAT
ACTTGGCACG AATCCGTGCG TTTCTTTGAT ATCTTCGATG GCGAAGGCAC ACTGCGCGGT
AGCTTCTACC TAGATCTATA CGCACGCGAA CACAAACGTG GCGGTGCGTG GATGGATGAT
TGCCGTGGTC GTCGTGTGAC GCTATCAGGC GAGCTACAAA CACCAGTTGC TTACCTAACG
TGTAACTTCA ACCGTCCAGT GGGCGACAAG CCTGCACTGT TTACACACGA TGAAGTCGTG
ACTCTGTTCC ACGAGTTTGG TCACGGTATT CACCACATGC TGACGCAAGT AGAAACAGGC
GCGGTATCGG GCATCAACGG TGTGCCTTGG GATGCGGTTG AGCTACCAAG TCAGTTTCTA
GAAAACTGGT GTTGGGAAGA AGACGCGCTG GCGTTTATTT CTGGTCACTA CGAGACTGGT
GAGCCGCTAC CAAAAGCGAT GCTAGACAAA ATGCTAGCAG CGAAGAACTT CCAGTCGGCG
ATGGGCATTC TACGTCAGCT AGAATTCGGC TTGTTCGATT TCACTCTGCA CACAGAATAC
GACCCAGAAG TGGGTGCTCG TGTACTTGAA ACCTTGGCAG AAGTGAAAGA GAAAGTGGCC
GTTGTACCAG CGGTTGAGTG GGCGCGTTTC TCACACAGCT TTGGTCACAT CTTCGCTGGT
GGCTACAGCG CAGGTTACTA CAGCTACCTA TGGGCAGAAG TGTTGTCTTC AGATGCGTTC
TCTCGCTTTG AAGAAGAAGG CATCTTCAAC AAAGAAACCG GTCTGAGTTT CTTGAACAAC
ATCCTAGAAA TGGGTGGCAG TGAAGAACCA ATGGAGCTAT TTAAACGCTT CCGTGGTCGT
GAACCAGAAA TCGATGCGCT ACTGCGCCAT TCAGGTATCG CAGCGTAA
|
|---|
| Protein sequence | MRIGKYRAKT QKELFMSNPL LTFTDLPPFS QIKPEHIKPA VEQAIADCRA KIDEVLKDNA
NPSWTSVIAP IEEADDRLSR IWSPVGHMNS VVNSEELREA YESCLPILSE YGTWVGQHKG
LYEAHKAIKA SEEYATLTRA QQKTISDSLR DFELSGIGLP SDEQHRYGEI SKRMSELSSK
FSNNVLDATM GWTKHVADEK DLAGMPESAL AAAKAAAEAK ELDGYLITLD IPSYLPVMTY
CDNQDLRKEV YEAYVTRASE RGPNAGKWDN SEIITEQLKL RHEISRMLGF NTYSEKSLAT
KMAENPAQVL GFLNDLATKA KPQGEREIEE LRQFANVEFG VSELNVWDIA YYSEKQKQHL
FQISDEELRP YFPESKAVSG LFEVLNRVFG MTVTEREGVD TWHESVRFFD IFDGEGTLRG
SFYLDLYARE HKRGGAWMDD CRGRRVTLSG ELQTPVAYLT CNFNRPVGDK PALFTHDEVV
TLFHEFGHGI HHMLTQVETG AVSGINGVPW DAVELPSQFL ENWCWEEDAL AFISGHYETG
EPLPKAMLDK MLAAKNFQSA MGILRQLEFG LFDFTLHTEY DPEVGARVLE TLAEVKEKVA
VVPAVEWARF SHSFGHIFAG GYSAGYYSYL WAEVLSSDAF SRFEEEGIFN KETGLSFLNN
ILEMGGSEEP MELFKRFRGR EPEIDALLRH SGIAA
|
|---|
| |