Gene VIBHAR_00525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00525 
Symbol 
ID5556261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp502620 
End bp503477 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content51% 
IMG OID640906020 
Producthypothetical protein 
Protein accessionYP_001443755 
Protein GI156972848 
COG category[R] General function prediction only 
COG ID[COG2961] Protein involved in catabolism of external DNA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTCGAG AGTTTAATTT GTTAAGTTAC CGCCACAGCT TCCACGCTGG CAACCATGCT 
GACGTGGTAA AACACATCGT TCAAAGCCTC ATTCTTGATG CACTAAAGCA GAAAGATAAG
CCGTTTGTTT ATCACGACAC CCACTCGGGT GTGGGACGCT ACGATCTGAC TCACGAATGG
TCTGAGAAAA CGGGCGAATA CAAACAAGGC ATCGCACGCA TTTGGGACAA CCCAAACATT
CCTGAAGAGA TCGCAAGCTA CATCGATTCA ATCAAAACGT TGAACAACGG TGAGAAGCTG
CGTTACTACC CAGGCTCACC GCGCGTTGCA CGTGCGCAAA TCCGCCCGCA AGACCGTATG
GTTCTGACTG AGCTGCACCC AGCCGATCAC CCGCTACTAG AGCAAGAGTT CCACCGCGAT
CGTCAAGTAA GCATCTACAA AGAAGATGGC TTTAAGCGTC TGAAAGGCAG TCTGCCTCCG
CAAGAACGTC GTGGTTTGGT GCTGATTGAC CCACCATACG AGCTAGCGAA AGAATACCGC
GACGTCGTGC AAGCGATTTT CCAAAGCCAC AAGCGTTGGG CAACGGGTAT CTACGCGATT
TGGTACCCAG TGGTAAACCG CTGTGATATC GAAGATATGA TTGAAGGCTT GGAAGGACTG
GGCATTCGCA AAATCCTGCA AATCGAATTG GGCGTCTCTC CAGACACCAA CGAGCGTGGC
ATGACGGCAT CAGGCATGAT CGTGATTAAC CCACCGTGGA AACTGGAAAG CCAGATGAAA
GAAATTCTGC CATTCCTGCA AGAAGCGATC GCGCCAGCAA CGGGGCACTG GAAAGTCGAC
TGGATCGTTC CTGAATAA
 
Protein sequence
MFREFNLLSY RHSFHAGNHA DVVKHIVQSL ILDALKQKDK PFVYHDTHSG VGRYDLTHEW 
SEKTGEYKQG IARIWDNPNI PEEIASYIDS IKTLNNGEKL RYYPGSPRVA RAQIRPQDRM
VLTELHPADH PLLEQEFHRD RQVSIYKEDG FKRLKGSLPP QERRGLVLID PPYELAKEYR
DVVQAIFQSH KRWATGIYAI WYPVVNRCDI EDMIEGLEGL GIRKILQIEL GVSPDTNERG
MTASGMIVIN PPWKLESQMK EILPFLQEAI APATGHWKVD WIVPE