Gene VIBHAR_00492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00492 
Symbol 
ID5553062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp470236 
End bp471951 
Gene Length1716 bp 
Protein Length571 aa 
Translation table11 
GC content49% 
IMG OID640905987 
ProductABC transporter ATPase component 
Protein accessionYP_001443722 
Protein GI156972815 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACTAT TAGAGGTGAA AAACCTTCGT ATTGAATATC CATCCCGTCA CGGTGTCCAT 
GCGGCCGTGA AATCGCTTTC TTTTCATATT GATCGTGGCG AAATTGTGGG TGTTGTTGGC
GAATCAGGTG CGGGTAAATC CACCGTTGGT AACGCCGTTA TTGATTTGCT TAGCCCTCCG
GGTCGTGTTG CCAGTGGCGA TGTGTACCTT GATGGCGAAA AAATATCTGG TTTAACACCA
GAAGCGATGC GTAAGGTTCG CGGCTCTAAG ATTGGCTTTA TCTTCCAAGA CCCAATGACC
TCGCTTAACC CTCTGTTTAC GGTTGAGCAG CAACTAAAAG AGACCATCCA CGCCAATATG
AGGGTGTCGG ATGAAGAGGC GTATCAACGC GCGCTTTCTC TTATGCAGCA GGTTGGTATT
CCTCAACCTG AAAACCGTCT TAAACAGTAC CCACACCAAT TCTCTGGCGG TATGCGTCAG
CGTGTGGTTA TTGCTATCGC ACTGGCTGGG GAGCCAGACC TGATCATTGC TGATGAGCCA
ACTACGGCAC TCGACGTATC AATCCAAGAC CAAATCCTAA ACCTTATCCG TGAACTGTGT
ATCAAGAACA ACGTAGGTTG TATGTTGGTG ACGCACGACA TGGGTGTGGT TTCAAACGTG
ACTGACCGTG TGGCAGTTAT GTACCGCGGT GATTTAGTGG AGTTTGGTCC AACCGCTAAG
GTGTTGGGCG ATCCTGATCA CCCATACACA CGCAGCCTAA TTTCAGCCGT TCCTCGTTCT
GATGTAAAAC TCGATCGCTT CCCGTTGGTC AGCTATATCG AAGAAGCGAC AGAGCTACAA
GAACTGGACA TTAAGAACCA CTGGCTAGGT CAAAGCCAAG ATCAGCGTGA GTACACGGGC
CCACTTTTGG ACGTGAAGAA CGTTAATCTG CGCTTTGTGA CCAAAGATTC ACTGTTTGAA
AGCCGCCGTG AATACGTGCA GGCCTCGAAC AATGTCAGCT TTGAAGTGCA CGAAGGCGAG
ACGTTTGGCT TGGTGGGTGA ATCTGGCTCA GGTAAATCGA CCATCGCACG CGTGATTGCT
GGCCTGTATG AACCAAACTT AGGGCAAGTC AGCTTTGAAG GCATTGACCT AACAGCGCTG
AAATCAGAAA AAGAGCGTCG TCCACTGCGT CGTCAAATGC AGATGGTCTT CCAAAACCCA
TACACGTCAA TGAACCCGCG TATGAAGATT TTTGACATCA TCGCGGAGCC AATTCGTTTC
CATAAACTGA CCAAGAATGA AGCGGAAACG CGTCAGATTG TGAATGACCT ACTTGATCAC
GTCGGTTTGG GCAAAATGGC GGGCGTGAAA TACCCTCATG AATTCTCCGG TGGTCAGCGT
CAGCGTATTT CTATTGCGCG AGCACTGGCG ACACGCCCTC GACTACTGAT TTGTGATGAA
CCGACATCAG CGTTGGATGT ATCGGTACAG GCACAAATTC TGAACTTGCT AAAAGATCTG
CAAAGTGAGC TCAACCTCAC CATGCTGTTT ATCAGCCACG ACTTACCGGT TATTCGCCAA
ATGTGTGACC GAGTGGGTGT GATGCAGATG GGTACGCTAC TGGAAGTGGC GCCAACTGAG
CAGCTATTTA CCGCTCCTCA GCATGAATAC AGCAAGAAAC TGATTTCTCT GATGCCTGAA
TTCACAGGCT TAAGAGAAGA AATCAAAACG GCATAA
 
Protein sequence
MSLLEVKNLR IEYPSRHGVH AAVKSLSFHI DRGEIVGVVG ESGAGKSTVG NAVIDLLSPP 
GRVASGDVYL DGEKISGLTP EAMRKVRGSK IGFIFQDPMT SLNPLFTVEQ QLKETIHANM
RVSDEEAYQR ALSLMQQVGI PQPENRLKQY PHQFSGGMRQ RVVIAIALAG EPDLIIADEP
TTALDVSIQD QILNLIRELC IKNNVGCMLV THDMGVVSNV TDRVAVMYRG DLVEFGPTAK
VLGDPDHPYT RSLISAVPRS DVKLDRFPLV SYIEEATELQ ELDIKNHWLG QSQDQREYTG
PLLDVKNVNL RFVTKDSLFE SRREYVQASN NVSFEVHEGE TFGLVGESGS GKSTIARVIA
GLYEPNLGQV SFEGIDLTAL KSEKERRPLR RQMQMVFQNP YTSMNPRMKI FDIIAEPIRF
HKLTKNEAET RQIVNDLLDH VGLGKMAGVK YPHEFSGGQR QRISIARALA TRPRLLICDE
PTSALDVSVQ AQILNLLKDL QSELNLTMLF ISHDLPVIRQ MCDRVGVMQM GTLLEVAPTE
QLFTAPQHEY SKKLISLMPE FTGLREEIKT A