Gene VIBHAR_00481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00481 
Symbol 
ID5553120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp463284 
End bp464390 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content46% 
IMG OID640905976 
Producthypothetical protein 
Protein accessionYP_001443716 
Protein GI156972809 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT GGACTTTCTT TATGGTGCTA ATCGCAATTC TCCTATTTGG GAGTGTGATA 
GGCTTCAACT TATTCAAACA GCAAAAAATT GCCGAATACA TGGCAAACCG TCCAGAGCCT 
GAATTCCCTG TAACCGTGAC CGAAGTACAA GCGGTAGATT GGGTTCCCGT TATTGAAGCG 
ATCGGCTTTA TTGAACCTAA TCAAGGTGTG ACTGTAGCCA ACGAAACTAG TGGAGTAATC 
GATAAGATTT CGTTTGAGTC AGGAACTCAA GTGGATACTG GTCAGTCTTT AATACACCTA 
GACTCCGATG TTGAAAAGGC AAACCTTCAG AGCTCACAAG CCAGACTGCC TGCCGCAAAA 
GCCAAATATA AACGCTACCA GGGTCTCTTC AAAAAAGGCT CTGTATCCAA GGAAGCGTAC 
GACGAGGCTG AAGCAAACTA CTTCTCGCTG AAAGCGGATA TTGAAAGCCT TAAAGCAACC 
ATAGACCGCC GTGAAATCAA AGCACCATTT ACTGGTGTAG TTGGTATTCG TAATGTTTAT 
CTTGGACAGT ACCTACAAGC TGGTACCGAT ATCGTGCGCC TTGAAGACAC CAGCGTGATG 
CGTCTAGGTT TCACTGTTTC CCAAACAGAT ATCTCTCGCA TCAAGCTAGA CCAAGAGGTA 
GACATCTTTG TTGATGCTTA CCCTGACAAG CCATTCAAAG GCTCTATCTC GGCGATTGAA 
CCAGCAGTTA ACGTTCAAAG CGGTCTGATC CAAGTGCAGG CAGACATTCC AAACAGCGAT 
GGCAAACTTC GTAGTGGTAT GTTCGCTCGT GCCAATATCA TTCTACCAAA GCTAGAGAAC 
CAAGTAACGC TGCCGCAAAC GGCTATCACG TTTACGCTGT ACGGCGATAA CGTCTACATT 
GTTACTGAAG ACGACGGTGA AAAACGGGTA AAACAGCACG TTGTGAAAGT GGGTGAACGA 
ACAAAAGACA TCGCGCATAT CCTAAATGGC GTGAAACCGG GTGACCTCGT AGTAACCTCT 
GGGCAAGTTC GCCTTAGTAA CCATGCAAAA GTGACCATCG TTGAAGATGC CGCACTTACA 
CCACCTGCTG AAACACCAAT GCTTTAA
 
Protein sequence
MKKWTFFMVL IAILLFGSVI GFNLFKQQKI AEYMANRPEP EFPVTVTEVQ AVDWVPVIEA 
IGFIEPNQGV TVANETSGVI DKISFESGTQ VDTGQSLIHL DSDVEKANLQ SSQARLPAAK 
AKYKRYQGLF KKGSVSKEAY DEAEANYFSL KADIESLKAT IDRREIKAPF TGVVGIRNVY 
LGQYLQAGTD IVRLEDTSVM RLGFTVSQTD ISRIKLDQEV DIFVDAYPDK PFKGSISAIE 
PAVNVQSGLI QVQADIPNSD GKLRSGMFAR ANIILPKLEN QVTLPQTAIT FTLYGDNVYI 
VTEDDGEKRV KQHVVKVGER TKDIAHILNG VKPGDLVVTS GQVRLSNHAK VTIVEDAALT 
PPAETPML