Gene VIBHAR_00462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00462 
Symbol 
ID5553184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp447159 
End bp448616 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content47% 
IMG OID640905957 
Productpotassium uptake protein TrkH 
Protein accessionYP_001443704 
Protein GI156972797 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0168] Trk-type K+ transport systems, membrane components 
TIGRFAM ID[TIGR00933] potassium uptake protein, TrkH family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTTC GTTCAATTAT TCGAATCGTC GGGCTATTGC TCGCACTTTT TAGTGTCACA 
ATGCTCGCGC CTGCGCTGGT TGCGCTTATT TATCGAGATG GTGCGGGTGT ACCTTTTGTC
ACGACTTTCT TCGTACTTCT CGTATGTGGT GGGATCTGTT GGTTCCCAAA CCGCAGGCAC
AAACACGAGC TAAAAGCACG CGATGGCTTC CTTATTGTTG TTCTTTTCTG GACTGTACTT
GGCAGTGCGG GCTCTATCCC TTTTCTGATC TCAGATAACC CCAATGTATC TGTGACTGAC
GCATTTTTTG AGTCTTTCTC TGCTTTAACG ACAACGGGAG CGACGGTCAT TGTCGGGCTC
GACGAACTGC CAAAAGCGAT CTTATTTTAT CGTCAGCTCC TGCAATGGTT TGGCGGCATG
GGTATCATCG TGTTGGCGGT AGCCATTCTT CCTGTTCTTG GTATCGGTGG TATGCAGCTG
TATCGAGCTG AAATACCAGG ACCGGTAAAA GATACTAAGA TGACCCCGCG TATTGCTGAG
ACAGCAAAAG CACTGTGGTA TATCTATTTG AGTCTGACTA TTGCGTGTGC CTTGGCATTT
TGGTTAGCAG GTATGACACC GTTTGATGCT ATTAGTCATA GCTTCTCTAC GATTGCCATC
GGTGGTTTTT CCACACATGA CGCCAGCATG GGCTATTTCG ATAGCTATGC CATTAACATG
ATTACCGTTG TCTTCTTGTT GATATCGGCA TGTAACTACT CTTTGCACTT CGCCGCGTTT
GCGTCCGGCG GCGTGCATCC TAAATACTAT TGGAAAGATC CAGAGTTCCG TGCGTTCATC
TTCATACAAG TTGTCCTGTT TTTAGTGTGC TTCCTGTTAT TGTTGAATCA CCACGCATAT
GACTCGCCAT ATGACGCTTT TGATCAGGCG CTATTCCAAA CAGTGTCGAT ATCTACTACT
GCTGGTTTTA CCACAACCGG TTTTGCTGAT TGGCCATTGT TCTTACCAGT GTTGCTGTTG
TTCTCGTCTT TTATAGGCGG TTGTGCTGGT TCGACTGGTG GCGGTATGAA AGTGATCCGT
ATTCTGTTAC TGACCTTACA AGGTGCTCGT GAGCTGAAGC GCTTGGTCCA CCCGCGTGCG
GTTTACACCA TTAAAGTGGG TGGCAGTGCA CTACCACAAC GTGTCGTTGA TGCGGTTTGG
GGATTCTTCT CTGCTTATGC GCTGGTATTT GTGGTTTGCA TGCTGTGTTT GATTGCTACT
GGAATGGATG AACTAAGTGC GTTCTCCGCG GTAGCGGCAA CATTGAATAA CCTTGGCCCG
GGCTTGGGAG AAGTGGCACT TCACTTTGGT GATGTTAACG ATAAAGCAAA ATGGGTATTG
ATTGTTTCTA TGTTGTTTGG TCGTTTGGAA ATCTTTACCT TACTTATTCT ACTTACGCCG
ACGTTTTGGC GTAGCTAA
 
Protein sequence
MQFRSIIRIV GLLLALFSVT MLAPALVALI YRDGAGVPFV TTFFVLLVCG GICWFPNRRH 
KHELKARDGF LIVVLFWTVL GSAGSIPFLI SDNPNVSVTD AFFESFSALT TTGATVIVGL
DELPKAILFY RQLLQWFGGM GIIVLAVAIL PVLGIGGMQL YRAEIPGPVK DTKMTPRIAE
TAKALWYIYL SLTIACALAF WLAGMTPFDA ISHSFSTIAI GGFSTHDASM GYFDSYAINM
ITVVFLLISA CNYSLHFAAF ASGGVHPKYY WKDPEFRAFI FIQVVLFLVC FLLLLNHHAY
DSPYDAFDQA LFQTVSISTT AGFTTTGFAD WPLFLPVLLL FSSFIGGCAG STGGGMKVIR
ILLLTLQGAR ELKRLVHPRA VYTIKVGGSA LPQRVVDAVW GFFSAYALVF VVCMLCLIAT
GMDELSAFSA VAATLNNLGP GLGEVALHFG DVNDKAKWVL IVSMLFGRLE IFTLLILLTP
TFWRS