| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00447 |
|---|
| Symbol | avtA |
|---|
| ID | 5553605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 430923 |
|---|
| End bp | 432176 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640905942 |
|---|
| Product | valine--pyruvate transaminase |
|---|
| Protein accession | YP_001443689 |
|---|
| Protein GI | 156972782 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3977] Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTTCT CAAAGTTTGG TGAAAAATTT AATCAGTATT CAGGTATCAC GCAGTTAATG
GACGATTTGA ATGATGGTCT GCGCACACCA GGTGCCATCA TGCTCGGTGG AGGCAACCCA
GCCGCCATTC CTGCCATGCT CGATTACTTT CGCCAAGCCA GTGAGGAAAT GCTCGCCAGT
GGGGAGCTCG TCGCTGCCCT CGCCAACTAT GATGGTCCGC AGGGTAAAGA CGCGTTCGTT
AAAGCGTTGG CTCAGTTATT CCGTGAAACT TACGGCTGGA ATATTTCCGA GAAAAACATC
AGCCTAACTA ACGGCAGCCA AAGTGGCTTC TTCTACTTGT TCAACTTACT AGCAGGTCAG
CAGCCAGACG GTTCGCACAA GAAAGTGCTA CTGCCTATCG CGCCTGAGTA CATCGGTTAT
GGTGATGCAG GCATTGATGA AGATATCTTT GTCTCTTACC ACCCAGAAAT CGAGCTGTTG
GATAACGGTC TATTTAAATA CCACGTCGAT TTTGAGCAGC TAAAAGTTGA TGACTCTGTT
GCGGCAATCT GCGCGTCTCG CCCAACCAAT CCAACAGGTA ACGTACTGAC AGATGAAGAA
GTACGTAAGC TGGACAAGCT AGCACGTGAG AACAACATTC CGCTGATCAT TGATAACGCC
TACGGTCTGC CGTTCCCGAA TATCATTTTT GAAGATGTCG AACCGTTCTG GAATGAAAAC
ACCATCCTTT GCATGAGCCT ATCTAAACTT GGCTTGCCGG GCGTCCGTTG TGGCATTGTG
ATTGCGAGTG AGGAAATCAC GCAAGCGTTG ACCAATATGA ACGGCATCAT CAGCTTAGCT
CCAGGCAGTG TTGGTCCAGC GCTGGCAAAC CACATCATTG ATAAAGGCGA GCTGCTTAAA
CTGAGCTCAG AGGTGATTAA GCCGTTTTAT AAGCAGAAGT CGCAACGTGC GGTTGAACTG
CTCCAAGAAG CGATTACCGA TGAGCGCTTT CGTATTCACA AACCGGAAGG CGCTATCTTC
TTGTGGTTAT GGTTCGATGA ACTGCCAATT ACGACAATGG AACTGTACCA ACGCTTGAAA
GTGCGTGGGG TTTTGATTGT TCCGGGTGAA TACTTCTTTA TTGGCCAAAA GGACGAGTGG
GATCATGCGC ACCAATGTTT GCGTATGAAC TACGTTCAAG GCGATGAGAT GATGCAAAAA
GGCATTGCGA TTATCGCAGA AGAGGTGGAA AAGGCTTACC GCGAAGGTAA ATAG
|
|---|
| Protein sequence | MQFSKFGEKF NQYSGITQLM DDLNDGLRTP GAIMLGGGNP AAIPAMLDYF RQASEEMLAS
GELVAALANY DGPQGKDAFV KALAQLFRET YGWNISEKNI SLTNGSQSGF FYLFNLLAGQ
QPDGSHKKVL LPIAPEYIGY GDAGIDEDIF VSYHPEIELL DNGLFKYHVD FEQLKVDDSV
AAICASRPTN PTGNVLTDEE VRKLDKLARE NNIPLIIDNA YGLPFPNIIF EDVEPFWNEN
TILCMSLSKL GLPGVRCGIV IASEEITQAL TNMNGIISLA PGSVGPALAN HIIDKGELLK
LSSEVIKPFY KQKSQRAVEL LQEAITDERF RIHKPEGAIF LWLWFDELPI TTMELYQRLK
VRGVLIVPGE YFFIGQKDEW DHAHQCLRMN YVQGDEMMQK GIAIIAEEVE KAYREGK
|
|---|
| |