Gene VIBHAR_00444 details

Gene Information

• Locus tag: VIBHAR_00444
• Symbol: recF
• ID: 5553831
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 426365
• End bp: 427438
• Gene Length: 1074 bp
• Protein Length: 357 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640905939
• Product: recombination protein F
• Protein accession: YP_001443686
• Protein GI: 156972779
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1195] Recombinational DNA repair ATPase (RecF pathway)
• TIGRFAM ID: [TIGR00611] recF protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCACTTT CTCGCCTCAT CATTCAGCAG TTTCGAAACA TTAAAGCCTG TGATATTGAC 
CTATCAGCAG GCTTTAACTT TCTTATTGGG CCGAACGGCA GCGGTAAAAC CAGTGTTCTA 
GAAGCAATTT ACTTGCTCGG ACACGGACGC TCTTTCAAGA GTTCGCTGAC GGGTCGAGTT 
ATCCAAAATG AGTGTGACGA GCTGTTTGTT CATGGTCGTT TTTTGAACTC GGATCAATTT 
GAGCTACCTA TCGGCATTAA TAAGCAGCGT GATGGCTCAA CAGAGGTTAA AATAGGCGGT 
CAATCTGGAC AAAAACTGGC GCAACTTGCA CAAGTTTTGC CTTTACAGTT GATACATCCA 
GAAGGATTTG ATCTACTAAC GGATGGTCCA AAACATCGTC GTGCATTCAT CGACTGGGGT 
GTGTTTCACA CCGAGCCTGC TTTTTATGAT GCATGGGGGC GTTTCAAGCG TCTTAACAAG 
CAACGCAATG CTCTGCTTAA AACGGCCAGA AGTTATCGTG AACTCAGTTA TTGGGATCAA 
GAAATGGCAC ATTTGGCTGA AAACATCAGT CAATGGCGAG CGCTATACAT CGAACAGATG 
AAAACCGTAG CGGAAACTAT CTGTCAGACG TTTTTGCCAG AATTTGAGAT CCAATTAAAG 
TATTATCGTG GTTGGGACAA AGACACCCCT TATCATGAGA TACTAGAAAA GAATTTCGAG 
CGTGATCAGT CATTGGGTTA CACCTTTAGT GGTCCAAATA AAGCTGATCT GCGCATTAAA 
GTGAACGGAA CGCCCGTTGA GGACGTTTTG TCACGCGGTC AATTAAAACT CATGGTGTGT 
GCTTTGCGTG TGGCGCAGGG GCAACACCTT ACCGAAATGA CCGGCAAACA ATGTATTTAC 
CTAATTGACG ACTTTGCGTC GGAATTAGAC AGCCAACGTC GCAAGCGTCT AGCTGACTGC 
TTGAAAGAGA CGGGCGCACA AGTATTTGTA AGCTCTATCA CTGAAAGCCA AATCGCCGAT 
ATGTTGGACG ATACGGGCAA ATTGTTTCAT GTGGAACATG GCAGGATAGA GTAA 

 

Protein sequence

MPLSRLIIQQ FRNIKACDID LSAGFNFLIG PNGSGKTSVL EAIYLLGHGR SFKSSLTGRV 
IQNECDELFV HGRFLNSDQF ELPIGINKQR DGSTEVKIGG QSGQKLAQLA QVLPLQLIHP 
EGFDLLTDGP KHRRAFIDWG VFHTEPAFYD AWGRFKRLNK QRNALLKTAR SYRELSYWDQ 
EMAHLAENIS QWRALYIEQM KTVAETICQT FLPEFEIQLK YYRGWDKDTP YHEILEKNFE 
RDQSLGYTFS GPNKADLRIK VNGTPVEDVL SRGQLKLMVC ALRVAQGQHL TEMTGKQCIY 
LIDDFASELD SQRRKRLADC LKETGAQVFV SSITESQIAD MLDDTGKLFH VEHGRIE