Gene VIBHAR_00443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00443 
Symbol 
ID5555568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp425255 
End bp426355 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content49% 
IMG OID640905938 
ProductDNA polymerase III subunit beta 
Protein accessionYP_001443685 
Protein GI156972778 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA CCATTGAACG TAGTCATTTA ATCAAACCGC TACAACAGGT TTCGGGCGCA 
CTAGGTGGCC GACCAACCCT ACCAATTCTG GGTAACCTAC TGCTTAAAGT AGAAGAAAAC 
GTGTTATCCA TGACCGCGAC CGATTTGGAA GTGGAATTGG TGAGCAAAGT GACTCTAGAA 
GGGGATTTCG AAGCGGGCAG CATTACCGTT CCTTCTCGTA AGTTTCTTGA TATCTGCCGT 
GGTCTGCCGG ATGACTCTAT CATCACCTTC GTACTAGAAG GCGATCGCGT GCAAGTTCGT 
TCTGGCCGTA GCCGTTTCTC ATTGGCAACA CTTCCAGCGA ACGATTTCCC GAACATCGAA 
GATTGGCAGA GTGAAGTGGA AGTATCACTG ACTCAGTCTG ATCTGCGTAC GCTGATCGAA 
AAAACGCAAT TCTCAATGGC GAACCAAGAC GTTCGTTACT ACCTAAACGG CATGTTGTTT 
GAAATCGACG GTACGACGCT ACGCAGCGTG GCAACCGATG GCCACCGTAT GGCGGTATCT 
CAAACTCAGC TCGGTGCGGA TTTTGCGCAG AAGCAAATCA TCGTGCCACG TAAAGGTGTA 
CAAGAGTTGG TTAAACTGAT GGACGCACCA GAGCAACCTG TTGTGCTACA AATCGGTAGC 
TCAAACGTGC GTGCAGAAGT GAACAACTTT ATCTTCACTT CTAAGCTGGT TGATGGTCGT 
TTCCCTGACT ATCGCCGCGT ATTGCCACAA AGTACCAACA AAACGTTGGA AACCGGTTGT 
GATGAACTGC GTCAGGCTTT CTCACGCGCT GCGATTCTTT CTAACGAAAA ATTCCGTGGT 
GTTCGTGTAA ATCTTGCGGG CAGTGAAATG CGCATTACCG CTAACAACCC AGAGCAAGAA 
GAAGCGGAAG AAATGCTCGA CGTGACCTTT GAAGGTGACG CTATCGAGAT CGGCTTCAAC 
GTAAGCTACG TGCTTGATGT ACTTAATACC CTGCGTTGCG ACAACGTGCG TGTGTCGATG 
TCGGATGCCA ACGCCAGTGC GTTGATTGAA AACGCAGACG ACGACAGTGC AATGTACGTG 
GTGATGCCAA TCCGTCTATA A
 
Protein sequence
MKFTIERSHL IKPLQQVSGA LGGRPTLPIL GNLLLKVEEN VLSMTATDLE VELVSKVTLE 
GDFEAGSITV PSRKFLDICR GLPDDSIITF VLEGDRVQVR SGRSRFSLAT LPANDFPNIE 
DWQSEVEVSL TQSDLRTLIE KTQFSMANQD VRYYLNGMLF EIDGTTLRSV ATDGHRMAVS 
QTQLGADFAQ KQIIVPRKGV QELVKLMDAP EQPVVLQIGS SNVRAEVNNF IFTSKLVDGR 
FPDYRRVLPQ STNKTLETGC DELRQAFSRA AILSNEKFRG VRVNLAGSEM RITANNPEQE 
EAEEMLDVTF EGDAIEIGFN VSYVLDVLNT LRCDNVRVSM SDANASALIE NADDDSAMYV 
VMPIRL