Gene VIBHAR_00435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00435 
SymboltrmE 
ID5553562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp417008 
End bp418369 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content50% 
IMG OID640905930 
ProducttRNA modification GTPase TrmE 
Protein accessionYP_001443677 
Protein GI156972770 
COG category[R] General function prediction only 
COG ID[COG0486] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACAG ATACGATTGT CGCTCAGGCT ACCGCACCCG GTCGTGGTGG TGTCGGCATT 
ATTCGTGTTT CTGGCCCTAA GGCCAATCAA GTGGCGCTAG AAGTCACAGG TAAGACGCTA
AAGCCTCGCT ACGCAGAGTA TCTGCCATTC CAAGCGGAAG ACGGCACAGT GCTAGACCAA
GGCATTGCCC TGTACTTCCC TAACCCACAC TCGTTTACAG GCGAAGACGT ACTTGAACTG
CAAGGTCATG GTGGCCCTGT TGTAATGGAT ATGCTGATTA AGCGTATCTT GGGTATTGAC
GGTGTGCGTG CCGCTCGACC AGGTGAGTTC TCAGAACGCG CTTTCCTAAA CGACAAGATG
GACCTCACTC AAGCAGAAGC GATTGCCGAC CTGATTGATG CCAGCTCAGA AGAAGCGGCA
AAATCCGCAC TACAATCACT GCAAGGTCAG TTCTCACAAC GCATCCAAAC GCTGGTGGAA
TCGCTGATCC ACTTACGTAT CTACGTGGAA GCGGCAATTG ACTTCCCAGA AGAAGAAATC
GACTTTTTGG CCGATGGTAA AGTATCTGGT GACCTACAAG CGATCATCGA TAACCTCGAT
GCGGTACGTA AAGAAGCCAA CCAAGGCGCG ATCATGCGTG AAGGCATGAA AGTCGTGATT
GCTGGCCGTC CTAATGCGGG TAAATCTAGC CTTCTGAATG CCCTATCTGG CAAAGAATCC
GCTATCGTTA CCGATATCGC CGGTACCACT CGTGATGTAT TGCGTGAACA CATCCATATC
GATGGTATGC CTTTACACAT CATCGATACC GCTGGTCTGC GTGATGCTTC TGATGAAGTA
GAGAAAATCG GTATCGAGCG TGCATGGGAT GAAATCGCCC AAGCAGACCG TGTTCTGTTT
ATGGTAGATG GCACCACAAC CGACGCAACG GATCCAAAAG ACATTTGGCC AGACTTCGTT
GATCGCTTGC CAAACAGTAT TGGCATGACG GTGATCCGTA ACAAAGCGGA TCAAACAGGT
GAAGAAATGG GGATCTGCCA TGTAAACGAT CCGACTCTGA TTCGCCTTTC TGCAAAAACA
GGCGCAGGTG TGGATGCTTT GCGTACTCAC TTAAAAGAGT GTATGGGCTT CTCAGGCAAT
ACGGAAGGCG GCTTTATGGC TCGCCGTCGT CACCTAGATG CGCTAGAACG TGCTGCTCAA
CATCTTCAAA TCGGCCAAGA ACAGCTTGAA GGCTATATGG CTGGCGAAAT CTTGGCAGAA
GAGCTGCGCA TTACTCAGCA GCACTTGAAT GAGATTACCG GAGAGTTCAG CTCTGATGAC
CTCCTAGGCC GAATCTTCTC CTCATTCTGT ATCGGTAAAT AA
 
Protein sequence
MTTDTIVAQA TAPGRGGVGI IRVSGPKANQ VALEVTGKTL KPRYAEYLPF QAEDGTVLDQ 
GIALYFPNPH SFTGEDVLEL QGHGGPVVMD MLIKRILGID GVRAARPGEF SERAFLNDKM
DLTQAEAIAD LIDASSEEAA KSALQSLQGQ FSQRIQTLVE SLIHLRIYVE AAIDFPEEEI
DFLADGKVSG DLQAIIDNLD AVRKEANQGA IMREGMKVVI AGRPNAGKSS LLNALSGKES
AIVTDIAGTT RDVLREHIHI DGMPLHIIDT AGLRDASDEV EKIGIERAWD EIAQADRVLF
MVDGTTTDAT DPKDIWPDFV DRLPNSIGMT VIRNKADQTG EEMGICHVND PTLIRLSAKT
GAGVDALRTH LKECMGFSGN TEGGFMARRR HLDALERAAQ HLQIGQEQLE GYMAGEILAE
ELRITQQHLN EITGEFSSDD LLGRIFSSFC IGK