Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00435 |
Symbol | trmE |
ID | 5553562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 417008 |
End bp | 418369 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640905930 |
Product | tRNA modification GTPase TrmE |
Protein accession | YP_001443677 |
Protein GI | 156972770 |
COG category | [R] General function prediction only |
COG ID | [COG0486] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTACAG ATACGATTGT CGCTCAGGCT ACCGCACCCG GTCGTGGTGG TGTCGGCATT ATTCGTGTTT CTGGCCCTAA GGCCAATCAA GTGGCGCTAG AAGTCACAGG TAAGACGCTA AAGCCTCGCT ACGCAGAGTA TCTGCCATTC CAAGCGGAAG ACGGCACAGT GCTAGACCAA GGCATTGCCC TGTACTTCCC TAACCCACAC TCGTTTACAG GCGAAGACGT ACTTGAACTG CAAGGTCATG GTGGCCCTGT TGTAATGGAT ATGCTGATTA AGCGTATCTT GGGTATTGAC GGTGTGCGTG CCGCTCGACC AGGTGAGTTC TCAGAACGCG CTTTCCTAAA CGACAAGATG GACCTCACTC AAGCAGAAGC GATTGCCGAC CTGATTGATG CCAGCTCAGA AGAAGCGGCA AAATCCGCAC TACAATCACT GCAAGGTCAG TTCTCACAAC GCATCCAAAC GCTGGTGGAA TCGCTGATCC ACTTACGTAT CTACGTGGAA GCGGCAATTG ACTTCCCAGA AGAAGAAATC GACTTTTTGG CCGATGGTAA AGTATCTGGT GACCTACAAG CGATCATCGA TAACCTCGAT GCGGTACGTA AAGAAGCCAA CCAAGGCGCG ATCATGCGTG AAGGCATGAA AGTCGTGATT GCTGGCCGTC CTAATGCGGG TAAATCTAGC CTTCTGAATG CCCTATCTGG CAAAGAATCC GCTATCGTTA CCGATATCGC CGGTACCACT CGTGATGTAT TGCGTGAACA CATCCATATC GATGGTATGC CTTTACACAT CATCGATACC GCTGGTCTGC GTGATGCTTC TGATGAAGTA GAGAAAATCG GTATCGAGCG TGCATGGGAT GAAATCGCCC AAGCAGACCG TGTTCTGTTT ATGGTAGATG GCACCACAAC CGACGCAACG GATCCAAAAG ACATTTGGCC AGACTTCGTT GATCGCTTGC CAAACAGTAT TGGCATGACG GTGATCCGTA ACAAAGCGGA TCAAACAGGT GAAGAAATGG GGATCTGCCA TGTAAACGAT CCGACTCTGA TTCGCCTTTC TGCAAAAACA GGCGCAGGTG TGGATGCTTT GCGTACTCAC TTAAAAGAGT GTATGGGCTT CTCAGGCAAT ACGGAAGGCG GCTTTATGGC TCGCCGTCGT CACCTAGATG CGCTAGAACG TGCTGCTCAA CATCTTCAAA TCGGCCAAGA ACAGCTTGAA GGCTATATGG CTGGCGAAAT CTTGGCAGAA GAGCTGCGCA TTACTCAGCA GCACTTGAAT GAGATTACCG GAGAGTTCAG CTCTGATGAC CTCCTAGGCC GAATCTTCTC CTCATTCTGT ATCGGTAAAT AA
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Protein sequence | MTTDTIVAQA TAPGRGGVGI IRVSGPKANQ VALEVTGKTL KPRYAEYLPF QAEDGTVLDQ GIALYFPNPH SFTGEDVLEL QGHGGPVVMD MLIKRILGID GVRAARPGEF SERAFLNDKM DLTQAEAIAD LIDASSEEAA KSALQSLQGQ FSQRIQTLVE SLIHLRIYVE AAIDFPEEEI DFLADGKVSG DLQAIIDNLD AVRKEANQGA IMREGMKVVI AGRPNAGKSS LLNALSGKES AIVTDIAGTT RDVLREHIHI DGMPLHIIDT AGLRDASDEV EKIGIERAWD EIAQADRVLF MVDGTTTDAT DPKDIWPDFV DRLPNSIGMT VIRNKADQTG EEMGICHVND PTLIRLSAKT GAGVDALRTH LKECMGFSGN TEGGFMARRR HLDALERAAQ HLQIGQEQLE GYMAGEILAE ELRITQQHLN EITGEFSSDD LLGRIFSSFC IGK
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