Gene VIBHAR_00433 details

Gene Information

• Locus tag: VIBHAR_00433
• ID: 5555957
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: -
• Start bp: 414102
• End bp: 415997
• Gene Length: 1896 bp
• Protein Length: 631 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640905928
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_001443675
• Protein GI: 156972768
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTTATC ACGAAAACTT TGACGTCATT GTTGTCGGTG GCGGACACGC AGGAACGGAA 
GCCGCGCTCG CATCTGCACG CACAGGACAA AAAACACTCC TCCTTACCCA TAACATCGAT 
ACATTAGGCC AGATGTCTTG TAATCCGGCG ATTGGTGGTA TCGGTAAAGG TCACTTAGTA 
AAAGAAGTGG ATGCTATGGG CGGTCTGATG GCTGAAGCCA TTGACCATGC AGGTATTCAA 
TTCCGAACAC TGAACGCCTC TAAAGGTCCA GCGGTTCGAG CAACACGTGC ACAAGCTGAC 
CGTGCATTGT ACAAAGCGTA CGTACGCAAC GCGCTAGAAA ACGCACCAAA CCTAACTCTG 
TTCCAACAAT CGGTTGATGA TCTGATTGTG GACCAAGATC GTGTGGTTGG CGTCGTAACG 
CAAATGGGCC TGAAATTCCA AGCGAAAGCG GTGGTATTAA CCGTAGGTAC TTTCCTTGGC 
GGAAAGATCC ATATCGGTAT GGAAAGCTCT TCAGGTGGTC GTGCTGGGGA TCCACCATCG 
ATCGCACTGG CGGATCGACT ACGTGAACTG CCATTCCGTG TCGATCGTTT GAAAACAGGT 
ACACCACCAC GTATCGATGC ACGCAGCGTG GATTTCTCAG TGTTGGAAGC ACAACACGGT 
GATAACCCAA CACCTGTATT CTCATTCATG GGCAAACGTG AGCATCAGCC GCGTCAAATC 
CCATGTTTTA TTACTCACAC CAATGAGAAA ACTCATGATG TGATCCGCAA CAACCTTGAT 
CGTAGCCCAA TGTACGCAGG CGTGATCGAA GGTATTGGCC CGCGCTACTG TCCTTCTATC 
GAAGACAAAG TAATGCGCTT TGCGGATAAG AACAGTCACC AAATCTTCAT TGAGCCAGAA 
GGCCTAACCA CGCACGAGTT ATACCCTAAC GGTATTTCCA CCAGCTTGCC GTTTGATGTG 
CAAGTACAAA TCGTTCGTTC AATGAAAGGT TTTGAGAACG CACACATCGT TCGTCCAGGT 
TACGCGATCG AGTACGATTT CTTCGACCCA CGTGATTTGA AGCAAACCTA CGAGACCAAG 
TTCATCAGTG GTCTGTTCTT TGCTGGTCAA ATCAACGGTA CGACTGGCTA CGAAGAAGCA 
GCAGCACAAG GTTTGATGGC AGGCTTGAAC GCAAGTTTGC ACAGTCAAGG CAAAGAAGGC 
TGGAGCCCAC GCCGTGACCA AGCTTACATG GGCGTGTTAA TCGATGATTT GTCGACGATG 
GGTACCAAAG AGCCGTACCG CATGTTCACT TCTCGTGCGG AATACCGTCT GTTGCTGCGT 
GAAGATAACG CCGATCTACG TTTGACGGAA AAAGCGCGTG AACTTGGTTT GATTGATGAT 
GCTCGTTGGG CACGTTTCAA CGAGAAAATC GAGAACATGG AAACCGAGCG CCAACGTCTA 
AAATCGACAT GGATGAACCC GAATTCTGCA GGCATTGATG AGCTGAACAA GCTATTGAAA 
ACACCAATGG CTCGTGAAGC AAGTGGTGAA GATCTTCTGC GTCGTCCAGA GATCTCATAC 
TCAGATCTCA CTCAGCTTGA TGCATTTGCA CCAGCTCTGG AAGATCAACA AGCGTCAGAG 
CAAGTTGAGA TTCAAGTGAA GTACGATGGC TACATCAAGC GCCAGCAAGA AGAGATCGAA 
AAATCGCTGC GTCATGAGCA CACTAAGCTC CCTGCAGACT TGGATTACAA AGACGTGAAA 
GGTCTGTCTA ACGAAGTCGT TGCTAAGCTG ACAGAAGCCA AACCAGAAAG CATTGGTATT 
GCTTCTCGTA TCTCAGGTAT CACGCCGGCA GCGATCTCTA TTCTGCTTGT TCACCTGAAG 
AAGCACGGTT TGCTGAAAAA AGGCGAGGAA GAGTAA 

 

Protein sequence

MLYHENFDVI VVGGGHAGTE AALASARTGQ KTLLLTHNID TLGQMSCNPA IGGIGKGHLV 
KEVDAMGGLM AEAIDHAGIQ FRTLNASKGP AVRATRAQAD RALYKAYVRN ALENAPNLTL 
FQQSVDDLIV DQDRVVGVVT QMGLKFQAKA VVLTVGTFLG GKIHIGMESS SGGRAGDPPS 
IALADRLREL PFRVDRLKTG TPPRIDARSV DFSVLEAQHG DNPTPVFSFM GKREHQPRQI 
PCFITHTNEK THDVIRNNLD RSPMYAGVIE GIGPRYCPSI EDKVMRFADK NSHQIFIEPE 
GLTTHELYPN GISTSLPFDV QVQIVRSMKG FENAHIVRPG YAIEYDFFDP RDLKQTYETK 
FISGLFFAGQ INGTTGYEEA AAQGLMAGLN ASLHSQGKEG WSPRRDQAYM GVLIDDLSTM 
GTKEPYRMFT SRAEYRLLLR EDNADLRLTE KARELGLIDD ARWARFNEKI ENMETERQRL 
KSTWMNPNSA GIDELNKLLK TPMAREASGE DLLRRPEISY SDLTQLDAFA PALEDQQASE 
QVEIQVKYDG YIKRQQEEIE KSLRHEHTKL PADLDYKDVK GLSNEVVAKL TEAKPESIGI 
ASRISGITPA AISILLVHLK KHGLLKKGEE E