| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00432 |
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| Symbol | gidB |
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| ID | 5553604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 413467 |
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| End bp | 414102 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640905927 |
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| Product | 16S rRNA methyltransferase GidB |
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| Protein accession | YP_001443674 |
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| Protein GI | 156972767 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
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| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGCTT TACGTACCAG ATTAGACGAG CTGATCGCGC AAACCGATTT GGAAGTGTCT
GAAAAACAAC GTGAGCAGTT GGTCGGTTAC GTCGAACTGC TCGACAAGTG GAACAAAGCT
TACAACCTAA CGTCGGTTCG TGACCCACTT GAGATGCTAG TGAAACATAT CCTTGATAGC
ATCGTCGTTA GCACTCACTT ACCAGGTGAG CGTTTTATCG ATGTTGGCAC AGGACCAGGT
TTGCCAGGTA TTCCATTGGC AATCATGAAT CCAGAGAAAA CCTTCTTCTT GCTCGATAGC
CTTGGCAAAC GCATCCGCTT TATCAAGCAA GTTGTGCACA CGCTAGGGCT GAAAAATGTG
ACGGCAATTC AAAGTCGCGT CGAAGAATTC CAGCCAGAAG AAAAATTTGA TGGCGTTTTG
AGTCGAGCTT TTGCTTCAAT GACGGACATG GTGGAATGGT GTCATCATCT GCCTAAACAA
GATTCTGGGG TGTTCTTAGC TTTGAAAGGG CTTCACCCTA AAGATGAAAT AGATCTGCTT
CCTGAATGGT GTAGTGTGAC AGAGGTCATA TCTTTAGCTG TTCCTGAGTT GGAAGGTGAT
CGTCATCTAG TAATCTTATC GCGCAAGGAA AATTAG
|
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| Protein sequence | MSALRTRLDE LIAQTDLEVS EKQREQLVGY VELLDKWNKA YNLTSVRDPL EMLVKHILDS
IVVSTHLPGE RFIDVGTGPG LPGIPLAIMN PEKTFFLLDS LGKRIRFIKQ VVHTLGLKNV
TAIQSRVEEF QPEEKFDGVL SRAFASMTDM VEWCHHLPKQ DSGVFLALKG LHPKDEIDLL
PEWCSVTEVI SLAVPELEGD RHLVILSRKE N
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