Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00413 |
Symbol | |
ID | 5555632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 395656 |
End bp | 397455 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640905908 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_001443655 |
Protein GI | 156972748 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGGTG CTCGCGCGCT GTGGCGTGCA ACAGGCGTAA AAGATGAAGA CTTCGGTAAG CCAATCATCG CCGTCGTAAA CTCGTTTACT CAATTTGTTC CGGGTCACGT ACACCTAAAA GACATGGGTC AGCTTGTAGC ACGTGAAATC GAAAAAGCCG GCGGCATCGC AAAAGAATTC AACACCATCG CGGTTGATGA TGGTATCGCA ATGGGTCACG GCGGCATGCT GTACTCACTG CCTTCACGTG AATTGATCGC AGACTCAGTA GAATACATGG TCAACGCACA CTGTGCCGAT GCCATGGTGT GTATCTCTAA CTGTGACAAA ATCACTCCGG GAATGTTGAT GGCATCTATG CGTCTTAACA TCCCTGTTAT CTTTGTCTCT GGTGGCCCGA TGGAAGCGGG TAAAACCAAG CTTTCTGATC AGATCATCAA ACTAGACCTT GTTGATGCAA TGATCCAAGG CGCGGATCCA AAAGTGTCTG ATGAGCAAAG CGAGCAGATC GAACGTAGCG CATGTCCAAC GTGTGGATCG TGTTCAGGCA TGTTCACTGC AAACTCAATG AACTGTCTAA TGGAAGCACT GGGTCTTTCT CAGCCGGGTA ACGGTTCTAT GCTGGCAACG CACGCTGACC GTGAGCAACT GTACCTTAAT GCGGGTCGTC GTATCGTTGA ACTGACTCGT CGTTACTACG AGCAAGATGA CGAATCAGCA CTGCCACGCA ACATCGCTAC GTTTGATGCC TTCGAAAACG CCATGGCACT GGACATCGCA ATGGGCGGCT CAACCAACAC CATTCTGCAT CTACTGGCTG CAGCGCAAGA AGGTGAAGTG GATTTCGATA TGGAAGATAT CGATCGCCTA TCTCGCCAAG TACCACACCT ATGTAAAGTG GCACCATCTA CCCAGAAATA TCACATGGAA GATGTACACC GCGCTGGTGG CGTAATGGCG ATTCTTGGTG AGTTAGACCG TGCAGGTCTA CTGCATAACC AAGCTCGCAC CGTACTTGGC CTTTCAATGA AAGAGCAGCT GGCAAAATAC GACATCATCC AGACCGAAGA TGAAGAGGTA TTAAAGTTCT TCCGCGCAGG TCCTGCTGGT ATCCGTACCA CTCAGGCATT CTCTCAGGAT TGTCGTTGGG ATCGCCTTGA TGACGACCGT GCAGAAGGTT GTATTCGAAC CAAAGAAAAT GCCTTTAGCC AAGAAGGTGG CCTAGCGGTT CTATCAGGCA ACATCGCATT AGATGGCTGT ATCGTTAAGA CAGCAGGCGT TGATGAGAGC ATCCATAAGT TCACAGGCCC GGCCGTAGTA TTTGAAAGCC AAGAAGACGC CGTAGAAGGT ATTTTAGGCG GCAAAGTTAA AGCCGGCGAT GTGGTTGTTA TCCGTTACGA AGGCCCTAAA GGTGGTCCGG GCATGCAAGA AATGCTCTAC CCAACCACTT ACCTAAAATC AATGGGACTC GGTAAAGAGT GTGCTCTTCT AACTGACGGC CGTTTCTCTG GCGGTACATC TGGCCTGTCT ATCGGTCACG CTTCTCCTGA AGCTGCAAAC GGCGGTGCCA TTGGTTTGGT TAAACAAGGT GATATGATCG CGATTGATAT TCCAAACCGT TCAATTTCAC TTCAAGTGTC TGAACAAGAA CTTGCTGAGC GCCGTGCAAA ACAAGACGAG TTAGGCTGGA AACCAGTAGA CCGCCAACGT GAAGTTTCAT TTGCACTCAA AGCGTACGCA AGTATGGCGA CCAGTGCTGA CAAAGGTGCA GTACGAGACA AATCTAAGCT CGAGGGCTAG
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Protein sequence | MAGARALWRA TGVKDEDFGK PIIAVVNSFT QFVPGHVHLK DMGQLVAREI EKAGGIAKEF NTIAVDDGIA MGHGGMLYSL PSRELIADSV EYMVNAHCAD AMVCISNCDK ITPGMLMASM RLNIPVIFVS GGPMEAGKTK LSDQIIKLDL VDAMIQGADP KVSDEQSEQI ERSACPTCGS CSGMFTANSM NCLMEALGLS QPGNGSMLAT HADREQLYLN AGRRIVELTR RYYEQDDESA LPRNIATFDA FENAMALDIA MGGSTNTILH LLAAAQEGEV DFDMEDIDRL SRQVPHLCKV APSTQKYHME DVHRAGGVMA ILGELDRAGL LHNQARTVLG LSMKEQLAKY DIIQTEDEEV LKFFRAGPAG IRTTQAFSQD CRWDRLDDDR AEGCIRTKEN AFSQEGGLAV LSGNIALDGC IVKTAGVDES IHKFTGPAVV FESQEDAVEG ILGGKVKAGD VVVIRYEGPK GGPGMQEMLY PTTYLKSMGL GKECALLTDG RFSGGTSGLS IGHASPEAAN GGAIGLVKQG DMIAIDIPNR SISLQVSEQE LAERRAKQDE LGWKPVDRQR EVSFALKAYA SMATSADKGA VRDKSKLEG
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