Gene VIBHAR_00412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00412 
Symbol 
ID5555986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp394662 
End bp395600 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content50% 
IMG OID640905907 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_001443654 
Protein GI156972747 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACGA AAACTGCAGA TTTCATTTGG TTTAATGGTG AGATGGTTCC ATGGGCAGAG 
GCGAACGTTC ACGTTTTGAC TCACGCGATG CACTACGGTA CCTCTGTATT TGAAGGCGTA 
CGCTGCTACA ACACGCCGAA AGGACCAATT GTCTTCCGTC ACCGTGAACA TGCACAACGT 
TTAAAAGACT CTGCCAAGAT TTACCGCTTC CCGATCCCGT TTTCTGTAGA AGAAATCATG 
GAAGCGACGC GTGAAACCCT GCGCCAGAAC AAACTCGACA GCGCTTACAT TCGTCCATTA 
GGTTTTGTCG GTAATGTTGG CTTGGGCGTG TGCCCACCTG TTGGCACAGA GATGGACCTA 
ATCATTGCCG CTTTCCCTTG GGGCTCTTAC TTGGGTGAAG AAGCGCTAGA AGCTGGCGTT 
GATGCAATGA TTTCAAGCTG GAACCGTGCA GCGCCAAACA CCATCCCAAC TGCGGCTAAA 
GCAGGCGGTA ACTACCTATC TTCATTGCTC GTTGGTGGTG AAGCGCGTCG TCACGGTTAC 
GACGAAGGTA TCGCACTGAG CGTAGACGGT TATCTATCGG AAGGTGCCGG TGAAAACATC 
TTTGTTATCA AGGACGGCGT GATCACCACA CCACCAGCAA CCAGTGCAAT TTTGCCGGGC 
ATCACTCGTG ATTCAATCAT GACCATCGCA CGCGATAAAG GTTATGAAGT GCGCGAAGCG 
AACATTGCGC GTGAAGCACT TTACCTTGCC GATGAAGTCT TTATGACAGG CACGGCAGCC 
GAAGTTGTGC CAGTAGCAAC CATCGACAAA ATTGAAGTGG GCACCGGTAA ACGCGGCCCA 
ATCACTAAAG AACTACAAGC GGCCTACTTT GGCCTATTTA ACGGCACCAC GGAAGATAAG 
TGGGGCTGGT TAGACTATGT GTACCCAGAA CAGAAGTAA
 
Protein sequence
MATKTADFIW FNGEMVPWAE ANVHVLTHAM HYGTSVFEGV RCYNTPKGPI VFRHREHAQR 
LKDSAKIYRF PIPFSVEEIM EATRETLRQN KLDSAYIRPL GFVGNVGLGV CPPVGTEMDL 
IIAAFPWGSY LGEEALEAGV DAMISSWNRA APNTIPTAAK AGGNYLSSLL VGGEARRHGY 
DEGIALSVDG YLSEGAGENI FVIKDGVITT PPATSAILPG ITRDSIMTIA RDKGYEVREA 
NIAREALYLA DEVFMTGTAA EVVPVATIDK IEVGTGKRGP ITKELQAAYF GLFNGTTEDK 
WGWLDYVYPE QK