Gene VIBHAR_00394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00394 
SymboltrkA 
ID5553833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp376897 
End bp378273 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content51% 
IMG OID640905889 
Productpotassium transporter peripheral membrane component 
Protein accessionYP_001443636 
Protein GI156972729 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCA TTATTCTTGG TGCTGGTCAG GTTGGCGGCA CACTGGCGGA AAACCTAGTT 
GGTGAGAATA ACGACATCAC CATCGTCGAC AAAAATGGCG ACCGACTGCG TGAGTTGCAA
GACAAGTACG ACCTACGAGT GGTCAACGGT CACGCAAGCC ACCCAGACGT TCTGCATGAA
GCAGGAGCGC AAGACGCTGA TATGCTTGTC GCAGTAACCA ACACCGACGA GACCAACATG
GCAGCCTGTC AGGTTGCGTT CACTCTGTTC AATACCCCCA ACCGTGTTGC ACGTATTCGT
TCTCCAGAAT ATCTGGCAGA AAAAGAAGCC CTATTTAAGT CTGGTGCTAT TCCTGTCGAT
CACCTTATCG CACCAGAAGA GTTGGTAACC AGCTACATCG AGCGCCTCAT TCAATACCCA
GGCGCGCTGC AAGTAGTAAG CTTTGCCGAG CAAAAAGTCA GCCTAGTAGC CGTTAAAGCC
TATTACGGTG GTCCGCTTGT GGGCAACGCT CTGTCTGCTC TGCGTGAGCA CATGCCACAC
ATCGATACTC GTGTTGCTGC GATTTTCCGT CAGGGACGTC CTATTCGCCC GCAAGGCACT
ACCATCATTG AAGCTGATGA TGAGGTGTTC TTCGTTGCTG CAAGTAACCA CATTCGCTCG
GTAATGAGTG AGCTTCAGCG ACTTGAGAAG CCTTACCGCC GCATCATGAT TGTTGGCGGT
GGTAACATCG GTGCGAGTTT AGCCAAACGC CTTGAGCAAA CTTACAGTGT TAAACTGATT
GAGCGTAACT ATCAGCGTGC AGAGAAGCTG TCTGAGCAAC TAGAAAATAC CATCGTTTTC
TGTGGTGATG CGGCAGACCA AGAACTGCTT ACTGAAGAAA ACATCGACCA AGTAGATGTG
TTCATTGCGC TGACTAACGA AGATGAAACC AACATCATGT CAGCGATGTT GGCAAAACGC
ATGGGCGCAA AGAAGGTGAT GGTGCTGATC CAACGCGGCG CTTATGTCGA CCTTGTACAA
GGCGGCGTGA TTGATGTGGC GATCTCCCCA CAGCAAGCGA CGATTTCTGC CCTACTCACG
CACGTTCGTC GTGCTGACAT CGTTAACGTT TCTTCTCTGC GTCGTGGCGC AGCAGAAGCC
ATCGAAGCCG TTGCGCACGG TGACGAGACC ACATCTAAAG TGGTCGGTCG CGCAATTGGC
GACATTAAAC TCCCACCAGG AACCACCATT GGTGCCATCG TTCGTGGCGA AGAAGTACTT
ATAGCACACG ATCGTACCGT CATCGAGCAA GATGACCACG TCGTGATGTT CCTGGTCGAC
AAAAAGTACG TACCAGACGT CGAAGCGCTG TTCCAGCCTA GCCCATTCTT CCTCTAG
 
Protein sequence
MKIIILGAGQ VGGTLAENLV GENNDITIVD KNGDRLRELQ DKYDLRVVNG HASHPDVLHE 
AGAQDADMLV AVTNTDETNM AACQVAFTLF NTPNRVARIR SPEYLAEKEA LFKSGAIPVD
HLIAPEELVT SYIERLIQYP GALQVVSFAE QKVSLVAVKA YYGGPLVGNA LSALREHMPH
IDTRVAAIFR QGRPIRPQGT TIIEADDEVF FVAASNHIRS VMSELQRLEK PYRRIMIVGG
GNIGASLAKR LEQTYSVKLI ERNYQRAEKL SEQLENTIVF CGDAADQELL TEENIDQVDV
FIALTNEDET NIMSAMLAKR MGAKKVMVLI QRGAYVDLVQ GGVIDVAISP QQATISALLT
HVRRADIVNV SSLRRGAAEA IEAVAHGDET TSKVVGRAIG DIKLPPGTTI GAIVRGEEVL
IAHDRTVIEQ DDHVVMFLVD KKYVPDVEAL FQPSPFFL