Gene VIBHAR_00391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00391 
Symboldef 
ID5553807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp373968 
End bp374486 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content46% 
IMG OID640905886 
Productpeptide deformylase 
Protein accessionYP_001443633 
Protein GI156972726 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTAT TACAAGTATT AACATTCCCA GATGATCGCC TGCGTACCGT TGCAAAACCT 
GTAGAAGAGG TGACACCTGA GATTCAAAAA ATCGTCGATG ACATGATTGA AACCATGTAC
GACGAAGAAG GTATTGGCCT GGCTGCAACG CAGGTTGATA TCCACAAACG TATCGTAGTG
ATTGATATTT CTGAAACTCG TGATGAGCCT ATGGTGCTTA TCAACCCTGA GATTCTAGAA
AAGCGTGGCG AAGATGGCAT CGAAGAAGGC TGTCTGTCGG TACCAGGTGC GCGTGCACTT
GTGCCTCGCG CTGCTGAAGT TACGGTTAAA GCGCTAGATC GCGATGGCAA AGAATACACC
TTTGAAGCCG ACGATCTGCT AGCAATCTGT GTTCAACACG AACTAGACCA CCTAATGGGC
AAACTGTTCG TGGATTACCT ATCGCCACTG AAGCGTAAGC GTATTCAAGA CAAGCTAGCG
AAAATCAAAC GCTTTAACGA GAAACAGCAA AACGCTTAA
 
Protein sequence
MSVLQVLTFP DDRLRTVAKP VEEVTPEIQK IVDDMIETMY DEEGIGLAAT QVDIHKRIVV 
IDISETRDEP MVLINPEILE KRGEDGIEEG CLSVPGARAL VPRAAEVTVK ALDRDGKEYT
FEADDLLAIC VQHELDHLMG KLFVDYLSPL KRKRIQDKLA KIKRFNEKQQ NA