Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00390 |
Symbol | |
ID | 5556075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 372735 |
End bp | 373829 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640905885 |
Product | hypothetical protein |
Protein accession | YP_001443632 |
Protein GI | 156972725 |
COG category | [S] Function unknown |
COG ID | [COG1652] Uncharacterized protein containing LysM domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGAA TTTTCCGCAA CGGTTCTCGT ATTACGTTGC CGTTACTTTT CTCTTTCAGT GCCGTAGCAA ACACGGATTC CCAACCACTT ACCGTTAAAG ATGATGCACC CAAAACTTAT GTTGTGGTTA AAGGTGACAC GTTGTGGGAT ATTTCGGCGA TGTATCTGGA TAGCCCTTGG TTGTGGCCTC GTCTATGGCA GGTAAACCCA GAAATTGATA ACCCACATCT GATTTACCCT GGCGATAAGT TGTCGTTAGT GTGGATTAAT GGCCAGCCAG TTTTAAGCTT AAAACCAGTC AAAAAGCTCA GCCCAAAAGC CCGTATCACG GAAAAGAAAG CGGTACCGAC TGTGGCGGAA GGGTTGGTGA TGCCATATCT GAAGTCTGAT CGTTTAGTTG ATGATGAGAC ACTAGATAAT GCAGCGAAAG TGATGGGTAG CAGCAAAGGC AATAAGTTCC TTACTGCAGA AGACACGCTG TACATCAGTG GTGAGCAAAC TTCGACTGGA TGGGCCATCT ACCGACCGGT GGAGACCTTT TCACGCGAGG ATGTATCACA AAAAATTACG GCTCTGCGTT TGATTGCGAA AGGGGAGCTT GTTGAAGCAT CCAGTGAGTT TTCTGGTTTG AAGATCACCA CGCAGCTGCA AGAGATTATC CGTAATGATA TTGCTTTGCC GGTACAAGCG TTAGATAGCG GCGACTTCAC GGCAACGTTC TATCCTCTTC CATCCCCACA AGGCACCTCT GCCAAACTAT TGGGTAACAT TGAAGGTATT CGTTATAGCT CGATCAACCA AGTGGTGGTG ATTGATAAAG GTACATCGGA TGAACTTCGC CAAGGCAGCG TGTTTGATTT AAAAGAGGAC GCGCATCCAG TATTCAAGAG TGGAGACGAC TTTGCTAAAG ATAACGGTGT ACTCGATACT GAGATTACTT TGCCAAAAAG CAAAGTAGGT GAGTTGCTTG TCATTCGTCC TTATGAATAC TTTAGCCTCG CGTTGATTAC TAATAGCACC AAGCCAATTA ATAAAGAGGT GTCTGTTGTT TCTCCTCTGG CTGAGGAATC AACCACCAAT GACACCACAA AATGA
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Protein sequence | MNRIFRNGSR ITLPLLFSFS AVANTDSQPL TVKDDAPKTY VVVKGDTLWD ISAMYLDSPW LWPRLWQVNP EIDNPHLIYP GDKLSLVWIN GQPVLSLKPV KKLSPKARIT EKKAVPTVAE GLVMPYLKSD RLVDDETLDN AAKVMGSSKG NKFLTAEDTL YISGEQTSTG WAIYRPVETF SREDVSQKIT ALRLIAKGEL VEASSEFSGL KITTQLQEII RNDIALPVQA LDSGDFTATF YPLPSPQGTS AKLLGNIEGI RYSSINQVVV IDKGTSDELR QGSVFDLKED AHPVFKSGDD FAKDNGVLDT EITLPKSKVG ELLVIRPYEY FSLALITNST KPINKEVSVV SPLAEESTTN DTTK
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