Gene VIBHAR_00387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00387 
Symbol 
ID5554231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp370571 
End bp371137 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content50% 
IMG OID640905882 
ProductDNA topoisomerase A 
Protein accessionYP_001443629 
Protein GI156972722 
COG category[L] Replication, recombination and repair 
COG ID[COG0551] Zn-finger domain associated with topoisomerase type I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGTA AAATCGATCA CAACCTTTTC TCGGCACACG AGCATGCGCT TGAGCGCGAA 
CCTTGCCCTA AATGCGGTGG GGAAGTTTCG CTTAAGCACG GTAAACACGG CCCTTTTCTA 
GGTTGTAGCC AATACCCAAG TTGCGATTAC ATTAAGCCGC TACACAGCAA TGATGGTCAC 
ATTGTGAAAG AGTTGGGTGT GCCTTGTCCT GAGTGTGGCA ACGAGCTGGT ACTCCGCCAA 
GGGCGCTACG GCATGTTCGT TGGTTGTAGC CATTACCCAG CCTGTCATCA TATTGAGTCG 
ATTAACCAAC CTGAACCACA GCAGCAGGCA AAAGAGCAAC ATGCTTGCCC TGAATGTGGT 
AAAGGGCATT TGGTTGAGCG TAAGACCCGA TTTGGTAAAA CATTCTACGC GTGTGATAAC 
TATCCGAAGT GCAAATTTGC GGTGAACTTG CCACCTGTAA GAGGCCGCTG CGAGGAATGC 
GGGTTTACCT TGTTGGTCGA AAAGAAACTG GCCAGCGGGG TTAAACTTCA ATGCGCGAGC 
CGTAAGTGCC AGCATACTCA AACTTAA
 
Protein sequence
MSSKIDHNLF SAHEHALERE PCPKCGGEVS LKHGKHGPFL GCSQYPSCDY IKPLHSNDGH 
IVKELGVPCP ECGNELVLRQ GRYGMFVGCS HYPACHHIES INQPEPQQQA KEQHACPECG 
KGHLVERKTR FGKTFYACDN YPKCKFAVNL PPVRGRCEEC GFTLLVEKKL ASGVKLQCAS 
RKCQHTQT