Gene VIBHAR_00347 details

Gene Information

• Locus tag: VIBHAR_00347
• ID: 5555991
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 333274
• End bp: 333978
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640905841
• Product: threonine efflux system
• Protein accession: YP_001443596
• Protein GI: 156972689
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTGATA CGACAATAGC CACTTGGTTA TATTTGAGAT GTGTTATGAA TGAATCCACC 
ATATTGCTGA CGCTCGCCAG CATTCACTTT ATTGCCCTAA TGAGTCCAGG TCCCGACTTT 
GCTCTGGTAG TACAAAACGC GACGCGTCAT GGTCGCCAAA CTGGTTTGTA CATCGCATTG 
GGTTTATCTG CCGGTATTTT GTTGCACTCT TTGTTCAGCC TGACAGGCGT GAGTTATATC 
GTCCACCAGC ACCCAGTGTT GTACTCCGTG GTACAACTGC TCGGTGGTAG TTACCTGCTC 
TATTTAGGTA TTGGTGCATT GCGCGCCGTG ATCTCAATGA TCAAAAACCC AAAGGCGGAT 
CAACCTAAGA AGCAAAATAA CCTAGTGATC AGCAATAAGC GTCAGGCATT TGCTAAAGGA 
TTTGCGACCA ACATTCTTAA CCCGAAAGCC TTGGTTTTCT TTATCAGTTT AATGTCGAGC 
TTAGTCCCTG CCGGCATGTC AGTGACTGGT AAAGGCATGG CTCTGGTGAT TCTGTTTGGT 
TTATCTCTGC TTTGGTTCTC TAGTCTCGCG TGGATGCTAT CAACACAGCG CTTACAACGT 
AAATTGCAGC AAGCGGGCAT CTACATCGAC GGTCTGTGTG GGGTGGTATT TACCCTAGTG 
GGTGGCAGTA TTTTGTACCA AACGATCAGC ACTTTTATCG GATAA 

 

Protein sequence

MLDTTIATWL YLRCVMNEST ILLTLASIHF IALMSPGPDF ALVVQNATRH GRQTGLYIAL 
GLSAGILLHS LFSLTGVSYI VHQHPVLYSV VQLLGGSYLL YLGIGALRAV ISMIKNPKAD 
QPKKQNNLVI SNKRQAFAKG FATNILNPKA LVFFISLMSS LVPAGMSVTG KGMALVILFG 
LSLLWFSSLA WMLSTQRLQR KLQQAGIYID GLCGVVFTLV GGSILYQTIS TFIG