Gene VIBHAR_00334 details

Gene Information

• Locus tag: VIBHAR_00334
• ID: 5555775
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: -
• Start bp: 318308
• End bp: 320161
• Gene Length: 1854 bp
• Protein Length: 617 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640905828
• Product: 3-polyprenyl-4-hydrozybenzoate decarboxylase
• Protein accession: YP_001443583
• Protein GI: 156972676
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases
• TIGRFAM ID: [TIGR00148] UbiD family decarboxylases

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTTA AGGATTTACG CGAATTTATC GACCACCTAG AACAGAAAGG TCGACTTAAA 
CGCATCACTC ACCCCGTCGA CCCCGCTTAC GAAATGACAG AAATTAGCGA CCGTACCTTG 
CGTGCTGGTG GCCCTGCGCT GTTGTTTGAG AACCCAATTG GCTACGACGT ACCTGTTTTG 
ACGAACCTAT TTGGTACGCC AGAGCGTGTC GCGATTGGTA TGGGACGTGA AGACGTTAAA 
GAATTAAGAG AAGTCGGTAA GCTGCTGGCT TATTTGAAAG AACCTGAGCC ACCAAAAGGC 
TTCAAAGACG CATTGGAAAA ACTGCCAGTG TTCAAGCAAG TATTGAACAT GCCAGCCAAG 
CGCTTAAGAA AAGCGCCATG CCAAGAGATT GTGTGGCAAG GTGATGAAGT CGATTTGGAT 
AAAATCCCGG TGATGAGTTG CTGGGCGGAA GACGTTGCGC CACTTCTTAC GTGGGGATTA 
ACCGTGACCA AGGGTCCAAA CAAAAAACGT CAGAACCTAG GTATTTACCG CCAACAGAAA 
ATCGCCAAGA ACAAAATCAT CATGCGTTGG CTAGCCCACC GAGGTGGTGC GCTTGACCTG 
CGCGATTGGA TGGAAACTAA TCCAGGTAAA CCTTTCCCTG TTTCGGTCGC GTTTGGTGCA 
GACCCAGCTA CCATTCTTGG TGCAGTAACG CCAGTGCCAG ATACGCTATC GGAATACGCA 
TTTGCAGGTT TGCTACGTGG CAGCAAAACG GAAGTCGTGA AGTCAGTTAG TAATGATTTG 
GAAGTGCCAG CGAGCGCTGA AATCGTGATG GAAGGCTATA TCGACCCGAA CGAGTTTGCC 
GATGAAGGTC CTTATGGCGA CCACACTGGC TACTACAACG AAAAAGAAAA GCACCACGTA 
TTTACCATCA CGCACATTAC CATTCGTAAA GACCCAATCT ACCACAGTAC CTACACAGGC 
CGTCCGCCAG ATGAGCCCGC TGTATTGGGT GTGGCATTAA ACGAAGTGTT TGTGCCGATT 
CTGCAAAAGC AATTCCCAGA GATTGAAGAC TTCTACCTAC CACCAGAAGG TTGTTCGTAC 
CGAATGGCGG TCGTCACCAT GAAGAAGCAG TACCCAGGAC ATGCCAAGCG CGTAATGATG 
GGTGTGTGGT CTTTCTTACG TCAATTCATG TACACCAAGT TTGTTATTGT GTGCGATGAA 
TCGGTAAACG CGCGAGATTG GAATGATGTC GTTAAAGCCA TGTCAGAGCA TATGGAGCCT 
GTTCGTGACA CCTTGATGAT AGACAACACG CCAATCGACT CACTTGACTT TGCTTCGCCT 
GTGGTTGGTC TTGGCTCCAA GATGGGGTTA GATGCAACTA TTAAATGGGA TGCCGAGCTA 
GCGACGCGAA CCGAGGTCAC TGAGCGAGAC AGCAAAGCGA TTACTGAAAC AGAACTGAAT 
GAGTTGAAAC AGCAACGCCC TGAGATTGTC GATATCTATC TACCTGCAAC AGCTAATAAC 
CAGTTCGCTG TTGTGACCAT GAAGAAAGAC CAAGCTGGTC AATCGCAAGC CTTGATGGAA 
TACCTGTGGG ACTTCTTTGC TCAGTACACG GATAACAAAT TCATTATCTT GTGCGACGAT 
GACGTTAATG CACGAGATTG GAATGACATC ATTTGGGCTG TAACAACCCG AATGGATCCA 
GATAGAGACA CTATTCAAGT GCATGGTAAG ACTCATAGTT CATCCAAATT AGGATTGGAT 
GCGACCAACA AGTTCGAATC CGAAGTCACG CGCGAGTGGG GTACGCCTAT CAAAAAAGAT 
CCTAAACTTG TGGCTAAAGT CGATGAGATT TGGGACCAGT TAGGTATTCT ATGA 

 

Protein sequence

MSFKDLREFI DHLEQKGRLK RITHPVDPAY EMTEISDRTL RAGGPALLFE NPIGYDVPVL 
TNLFGTPERV AIGMGREDVK ELREVGKLLA YLKEPEPPKG FKDALEKLPV FKQVLNMPAK 
RLRKAPCQEI VWQGDEVDLD KIPVMSCWAE DVAPLLTWGL TVTKGPNKKR QNLGIYRQQK 
IAKNKIIMRW LAHRGGALDL RDWMETNPGK PFPVSVAFGA DPATILGAVT PVPDTLSEYA 
FAGLLRGSKT EVVKSVSNDL EVPASAEIVM EGYIDPNEFA DEGPYGDHTG YYNEKEKHHV 
FTITHITIRK DPIYHSTYTG RPPDEPAVLG VALNEVFVPI LQKQFPEIED FYLPPEGCSY 
RMAVVTMKKQ YPGHAKRVMM GVWSFLRQFM YTKFVIVCDE SVNARDWNDV VKAMSEHMEP 
VRDTLMIDNT PIDSLDFASP VVGLGSKMGL DATIKWDAEL ATRTEVTERD SKAITETELN 
ELKQQRPEIV DIYLPATANN QFAVVTMKKD QAGQSQALME YLWDFFAQYT DNKFIILCDD 
DVNARDWNDI IWAVTTRMDP DRDTIQVHGK THSSSKLGLD ATNKFESEVT REWGTPIKKD 
PKLVAKVDEI WDQLGIL