| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00310 |
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| Symbol | |
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| ID | 5556428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 298161 |
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| End bp | 299414 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640905805 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001443565 |
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| Protein GI | 156972658 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATTACT TCAACTATCA GGATGATGGC CAGCTTTGGG CCGAAGACGT CTCACTCCAA
GCTCTCGCCG AGCAACATGG CACTCCTCTT TATGTTTACT CACGAGCAAC GCTAGAGCGT
CACTGGAATG CGTTTGATAG CGCTGTGGGT CAGTATCCTC ATCTTGTTTG TTACGCAGTA
AAAGCAAACT CTAATCTTGG CGTATTGAAT GCACTGGCTC GTTTGGGGTC AGGTTTCGAT
ATTGTATCGG GTGGTGAGCT TGAACGCGTT ATCGCGGCTG GCGGTGATGC GAAGAAGGTA
GTGTTCTCGG GTGTTGGTAA AACGCCAGCA GAGATGAAAC GCGCACTGGA GCTGGGCATC
AAATGCTTCA ACGTGGAATC AGAACCTGAA CTTGAGCGCT TGAACAAAGT CGCAGGTGAG
TTAGGTGTGG TTGCACCGAT TTCTCTACGA ATTAACCCTG ACGTAGACGC AAAAACACAC
CCTTATATCT CGACTGGTCT GCGCGACAAC AAGTTTGGTA TCGCTTTTGA CCGTGCTCCG
GCAGTATATA AATTTGCTCA GAGCCTACCA AATCTCAACG TGCAAGGTAT CGACTGCCAC
ATTGGTTCTC AGTTGACTGA GATTGAACCT TTCATCGACG CGACAGATCG CCTCTTGGCT
CTGATTGATG ATCTGAAAGC ACAAGGCATC AACATCCGTC ATCTGGACGT TGGTGGTGGT
CTGGGTGTGG TATATCGTGA TGAATTGCCA CCACAGCCTT CTGATTACGC GAAAGCACTG
TTAGGTCGTC TTGAGAACCA TCAAGATCTT GAACTGATTT TCGAACCAGG TCGTGCAATT
GCAGCTAACG CTGGTATCTT GCTGACGCGT GTGGAATTCC TAAAACACAC TGAGCACAAA
AACTTTGCGA TTATCGATGC GGCGATGAAC GACTTAATGC GTCCTGCGCT GTATCAAGCA
TGGCAAGATA TTGTCCCAGT TTCACCACGC GAAGGTGAAG CACACACTTA CGATTTAGTC
GGACCTATCT GTGAAACGGG CGATTTCTTG GGCAAAGATC GAGCACTAGT ACTGCAAGAA
GGTGATCTAC TCGCGGTTCG CTCTGCTGGC GCCTATGGTT TTGTGATGTC TTCGAACTAC
AATACTCGTA CCCGAGCGGC GGAAGTGATG GTGGATGGCA ACCAAAGCCA CCTTGTTCGC
CAGCGTGAGG AGCTGACCAG TTTGTGGCAG CTGGAACAGA TTCTACCGGA GTAA
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| Protein sequence | MDYFNYQDDG QLWAEDVSLQ ALAEQHGTPL YVYSRATLER HWNAFDSAVG QYPHLVCYAV
KANSNLGVLN ALARLGSGFD IVSGGELERV IAAGGDAKKV VFSGVGKTPA EMKRALELGI
KCFNVESEPE LERLNKVAGE LGVVAPISLR INPDVDAKTH PYISTGLRDN KFGIAFDRAP
AVYKFAQSLP NLNVQGIDCH IGSQLTEIEP FIDATDRLLA LIDDLKAQGI NIRHLDVGGG
LGVVYRDELP PQPSDYAKAL LGRLENHQDL ELIFEPGRAI AANAGILLTR VEFLKHTEHK
NFAIIDAAMN DLMRPALYQA WQDIVPVSPR EGEAHTYDLV GPICETGDFL GKDRALVLQE
GDLLAVRSAG AYGFVMSSNY NTRTRAAEVM VDGNQSHLVR QREELTSLWQ LEQILPE
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