Gene VIBHAR_00307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00307 
SymbolxerC 
ID5555268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp295688 
End bp296629 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content52% 
IMG OID640905802 
Productsite-specific tyrosine recombinase XerC 
Protein accessionYP_001443562 
Protein GI156972655 
COG category[L] Replication, recombination and repair 
COG ID[COG4973] Site-specific recombinase XerC 
TIGRFAM ID[TIGR02224] tyrosine recombinase XerC 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACAA CTCCCAACAC TCCTCTGCCA AATAGTCTTC AAAAGCCTCT TGAACGCTTC 
TACGAATTCC TGCGAAGCGA AAAGGGGCTT AGCCTGCACA CCCAACGCAA CTACAAACAA 
CAATTGGAAA CCATGGCTCA CCACTTGGCT GAGATGGGTT TGAAAGATTG GTCGCAAGTC 
GATGCAGGTT GGGTGCGTCA ACTGGCAGGT AAAGGCATGC GTGAAGGCAT GAAAGCCAGC 
AGCTTAGCGA CGCGCTTATC TTCTCTACGC AGCTTTTTCG ATTTCCTGAT CCTACGTGGA 
GAAATGTTAG CGAACCCTGC TAAAGGGGTT TCGGCACCAC GTAAGAAACG CCCACTGCCG 
AAAAACCTCG ATGTGGATGA AGTAAACCAA TTGCTCGAAG TGAACGAGGA CGACCCGTTA 
GCGGTGCGCG ATCGTGCCAT GATGGAGCTA ATGTACGGCG CTGGTCTGCG TTTGGCAGAA 
CTGGTTAGCG TCGATGTGCG TGATGTTCAG CTACGGAGTG GCGAATTACG AGTGATTGGT 
AAAGGTGACA AAGAACGTAA AGTGCCGTTC TCTGGTATGG CAACTGAATG GGTTGGTAAA 
TGGTTGCGTG TGCGTGGTGA TCTAGCCGCG CCGGGTGAAC CTGCACTGTT TGTTTCCAAG 
CTGGGTACAC GGATCTCACA CCGCAGTGTG CAAAAGCGCA TGGCGGAGTG GGGGCAGAAA 
CAGTCGGTCG CGAGTCACAT TAGCCCGCAC AAACTGCGTC ACTCGTTTGC AACGCACATG 
CTGGAATCGA GCAACAACCT ACGTGCGGTG CAAGAGCTAT TGGGGCACGA AAACATCTCG 
ACTACCCAAA TCTATACCCA CTTGGATTTC CAACATTTAG CGCAAGCTTA TGATCAGGCG 
CATCCAAGAG CGCGTAAGAG AAACGACGAC AAGTCGGATT AA
 
Protein sequence
MTTTPNTPLP NSLQKPLERF YEFLRSEKGL SLHTQRNYKQ QLETMAHHLA EMGLKDWSQV 
DAGWVRQLAG KGMREGMKAS SLATRLSSLR SFFDFLILRG EMLANPAKGV SAPRKKRPLP 
KNLDVDEVNQ LLEVNEDDPL AVRDRAMMEL MYGAGLRLAE LVSVDVRDVQ LRSGELRVIG 
KGDKERKVPF SGMATEWVGK WLRVRGDLAA PGEPALFVSK LGTRISHRSV QKRMAEWGQK 
QSVASHISPH KLRHSFATHM LESSNNLRAV QELLGHENIS TTQIYTHLDF QHLAQAYDQA 
HPRARKRNDD KSD