Gene VIBHAR_00305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00305 
Symbol 
ID5555236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp292334 
End bp294820 
Gene Length2487 bp 
Protein Length828 aa 
Translation table11 
GC content48% 
IMG OID640905800 
Productsensory transduction protein kinase 
Protein accessionYP_001443560 
Protein GI156972653 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAGCAT TCTCTCAACT GGTTCAAAAT GTGGATCAGC TTAATGACTT TTTAGTCACT 
TCTCAGTGTT GTGCAGATAA ACGTTATCTG GTGCAACTCT TATCCACCCA ATCACGTGAC
TCCGCCGTCT CGCTCGCTCG GGCAATACTC GAAAGATTAC CCAACACGCA CATCATCGGT
CACAGCACCC GTCACGTTAT CTTGGAAGGT GAAATCATCA ACCATGGCTG CTTAGTGTGT
GTGATGGAGT TTGAACAAAC CACGCTCACG TCTGCGGTTC AGCATTATTC CTTCTCGCCA
GATATCGATG GCTACGATCT CAAGCAAGCT TTACAACTGC AAGATAACTC CAAAGCCATT
ATTAGCTTTT CTGTCCAAAT CGAACGCCGT GATTATCCGG TGTATCGCGT ATTTGATGCC
GACGGTCCGA AGGTTTCTGG CGGTTTGGCT CAAACCATCG ATGACGGTTG TTGGGTTCTG
CATCAAGACC AAGTTTATGA TGAAGCGGTT GTCGCGGTTG CCTTGCACAG CAATACTTTG
AAAACATGGA CGAGCGCGTA TTCTGAGTGG AACCCGATTG GTATGCCGCA TAAGGTTACT
CACGCCAAAG GGACGCGCTT GTATCGCTTG GGCGAGCGTA AAGCGTTGGA AGTGTACAAA
CATTACCTTG CTGACGGGCA CGACCTATCG CTCAATCAAC TGCTGAATTT CCCACTTTAT
CGAGAATCCA TTGGGCGAAA AGAGGTGTGT GCCGTGACGG AAATCCATCC CGACGGCAGC
ATGAGCTTCG ACCGTCCTTG GTGTTTGGGT GATGAAGTTC AGTTCTGTTA CAACCATCCT
TCGTTAACGC TTGAGCAAGT TCGCCATGGG GTGGTGGAGC TTTCCATGCA TCAACCTGAA
GCAGTGATGA TTTATAACTG CGCATCGCGA CTTAATTTTA TTGATAGCAG TGATGAAGTT
CGCGCCTTCA CGGACATTTC CCACACGTCG GGCAGTTACT GCATGGGTGA GTTGTACGGG
GAGAATCACC AACAAGAAAT TCTGCACCAT AGCCTGACTT ACTTGGCGAT GCGTGAAGGG
GATGAAGTTA CTGCGCTTAA CATGCCACAG CAAGAAGTGA GCACTTCTAT CTCTCCCTTG
TTTAGCCTGA TCCGCAATGC GATTGGCGAT CTAAATAACA TGAACGCTCA TATGGGGTAT
CAACTCGATC GCCAAGCGAA AAAGCTAGAA CAGAGCTTCC GCCGAGATAG CCGCACAGGA
TTACAAAATC GCGTTGCGTT GCAAGAGCGC TTGATCAGCA TTGATGTCGA TGAACATTTA
CTAACGCTCA AACTGCTTAA CTTTAGCCAT ATCAACGAAA AGTACGGCTA TCGCGTTGGC
GACCAACTGT TGAAAGACTT GTCGATGCAC TTTAGCAATC GCCTGCGTAA ACGGCTTGGT
AAACCTGCCG CGCTGCAACT TTATAGCATT GGTGTCGGTG AGTGGGCGTT CTTATTCAAA
GCTGACGGAA GCAGTGAAAT GATTAAGCAA CACTTCACTC GGTTTGCTGA TGCGGTTGAG
CAAACCAACT TTGAACCAAG TGGCTTACGA GACATTGATT ACCTTTCGAT TTCATTGTGC
GGTGGCTTAG TTAGCCGTCG TGATTTTCCA ACTGCATCGC CGGATGAATT GCTCCTCAAA
GGCATTGAAG CGCGAAGAGC TGGGGTGCGA AGTAATACTC ATATCTGTAA TGCCAAAGAC
ATTGAGGTCA ATGAAGATGT GCGAAAAGAG CAGTTGGGTT GGTTGAGCTG TGTGAGCCGC
GCCATTCTCA AGCAGAACAT CATTACCTAC AGTCAGCCAA TTGTGCACGC TTACAACCAT
CGTCCCGCGA GCCAAGAGTG TTTGGTGCGC ATTATGGAAG AGGATGGCAG CATCATTGCG
CCGGGGCGTT TCTTACCTAT CATTTCTGAT ACACATTTGT ACACGCGTTT GAGCCGTCAC
ATGATCCGTT CCACGTTGAA TTACATGAAG GACAAACAAG GCGACTTCTC AATTAATTTG
TCACCTCAGG ATTTACTCAG CGATAAAACC TTGATGTTGC TTGAACATGC TATTACTCAG
CTGAACGACC CAAGACGGAT TGGTTTAGAA GTGTTGGAAT CAGAGCAAAT CAAAGATTAC
GGAAGGATGA TTGAGGTGTG CAGTCACTTT AGAAGCCTAG GCGCACGCAT CATTGTCGAC
GACTTTGGCT CGGGTTACTC CAATATTGAT GAGATCCTCA AGTTAGAGCC GGAAGTGATT
AAGCTCGATG GCAGTTTGAT TCGCTATATC GACAAAGACC AAAAGCAGTG CAAGATTGCC
TCGCAGTTGG TGCGTTTGTG TCAGGTGTTT AACGCTAAGA CTGTCGCGGA GTTCGTGCAC
AACAAAGAGG TGTGCGACAT TGCTCAGGAC ATGGGGGTGG ACTATCTGCA AGGTTATTAT
TTGGGTGAAC CGACACGCTT GTTTTAA
 
Protein sequence
MRAFSQLVQN VDQLNDFLVT SQCCADKRYL VQLLSTQSRD SAVSLARAIL ERLPNTHIIG 
HSTRHVILEG EIINHGCLVC VMEFEQTTLT SAVQHYSFSP DIDGYDLKQA LQLQDNSKAI
ISFSVQIERR DYPVYRVFDA DGPKVSGGLA QTIDDGCWVL HQDQVYDEAV VAVALHSNTL
KTWTSAYSEW NPIGMPHKVT HAKGTRLYRL GERKALEVYK HYLADGHDLS LNQLLNFPLY
RESIGRKEVC AVTEIHPDGS MSFDRPWCLG DEVQFCYNHP SLTLEQVRHG VVELSMHQPE
AVMIYNCASR LNFIDSSDEV RAFTDISHTS GSYCMGELYG ENHQQEILHH SLTYLAMREG
DEVTALNMPQ QEVSTSISPL FSLIRNAIGD LNNMNAHMGY QLDRQAKKLE QSFRRDSRTG
LQNRVALQER LISIDVDEHL LTLKLLNFSH INEKYGYRVG DQLLKDLSMH FSNRLRKRLG
KPAALQLYSI GVGEWAFLFK ADGSSEMIKQ HFTRFADAVE QTNFEPSGLR DIDYLSISLC
GGLVSRRDFP TASPDELLLK GIEARRAGVR SNTHICNAKD IEVNEDVRKE QLGWLSCVSR
AILKQNIITY SQPIVHAYNH RPASQECLVR IMEEDGSIIA PGRFLPIISD THLYTRLSRH
MIRSTLNYMK DKQGDFSINL SPQDLLSDKT LMLLEHAITQ LNDPRRIGLE VLESEQIKDY
GRMIEVCSHF RSLGARIIVD DFGSGYSNID EILKLEPEVI KLDGSLIRYI DKDQKQCKIA
SQLVRLCQVF NAKTVAEFVH NKEVCDIAQD MGVDYLQGYY LGEPTRLF