Gene VIBHAR_00301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00301 
Symbol 
ID5555185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp288683 
End bp289495 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content47% 
IMG OID640905796 
Producthydrolase 
Protein accessionYP_001443556 
Protein GI156972649 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACAT CGCTACCTTG CAAAGAGATC ACCAAAATCG TTGCCTCAGA TCTGGATGGC 
ACTTTACTCG CACCAAACCA CCAGCTAAGC GCTTACTCGA GAGAGACGCT AAAAGCGCTG
CATGAATTTG TCTTTGCAAC GGGTCGCCAC CACGTAGACG TCGCAAGCAT TCGTCGCACG
GTAGGTATTC CGGCTTACAT GATTACTTCG AATGGAGCAC GTGTGCACGA CCAGAATGAT
CAAGAGATGT ACAGCCAGAA CGTACCTGAA GATTTGGTGC AGCCAGTGAT CGACACGATC
AAAACGGATC CTGAAATACT TATCCACATG TATCAAAACG ACGACTGGTT GTTGAACAAA
GATGACGATG AGTTACGCGA ATTCCATGAA GAGTTCACTT ATAAGTTGTA CGATCAAAAC
AACGCACCAA CTGATGGCAT TGCGAAAATC TTCTTCACTC ACCCAGCAAA AGATCACGAC
CATCTTGTGA CCTTCGAAAC TAAGTTACGT GAGCAATTTG GCGATCGACT AAACATCGCA
TTCTCAACAC CTTGGTGTTT GGAAGTGATG AGCGCTGGTG TGTCTAAAGG TGATGCGTTG
AAGGCAGTCG CGGAGTCTAT TGGGCTAACA TTGGAAAACA CCATCGCCTT TGGTGATGGC
ATGAACGACG TAGAAATGCT ATCTATGGCG GGTAAAGGAT TGGTGATGGG CACATCTCAC
GAGAAAGTGA TGAAAGCACT ACCAAACAAT GAAGTAATCG GCAGCAACGT CGACGATGCG
GTTGCACACT ACCTACAAGA TCATCTGCTA TAA
 
Protein sequence
MSTSLPCKEI TKIVASDLDG TLLAPNHQLS AYSRETLKAL HEFVFATGRH HVDVASIRRT 
VGIPAYMITS NGARVHDQND QEMYSQNVPE DLVQPVIDTI KTDPEILIHM YQNDDWLLNK
DDDELREFHE EFTYKLYDQN NAPTDGIAKI FFTHPAKDHD HLVTFETKLR EQFGDRLNIA
FSTPWCLEVM SAGVSKGDAL KAVAESIGLT LENTIAFGDG MNDVEMLSMA GKGLVMGTSH
EKVMKALPNN EVIGSNVDDA VAHYLQDHLL