| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00298 |
|---|
| Symbol | |
|---|
| ID | 5555147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 285590 |
|---|
| End bp | 286813 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640905793 |
|---|
| Product | signal transduction protein |
|---|
| Protein accession | YP_001443553 |
|---|
| Protein GI | 156972646 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATG CGTATGTCGC CCGCCAGCCT ATCTTTAATC GTAAAAGACA GACGCTGGGA
TATGAGTTGT TGTTCCGTGA TGGTGAAAGT AATGCCTATC CTGCACACAT CGATTCAAAC
AGGGCGACAT ACCGATTGAT TGTAGAGAAT TTTCTCTCTG TCGGAACCAA TCCTCTGATT
GCATCGTCAC GATGCTTCAT CAACTTCCCT CAACAGAGCT TGTTGCGTCG GCTACCAAGA
AGTTTGCCGA AAAACAAAAT CGTGGTTGAG GTACTCGAAA CCTGCCAACC GACCGATGAA
CTGCTTGAAG CCATTCGCGA ACTTTACCGT GAAGGCTATT TGATTGCGCT CGATGACTTC
ACTTTGACTG ATGAATGGCG TCGCTTCTTG CCTTATGTCC ACATTGTAAA ACTCGATATC
ATGGCGATGG GGCTTGAGAA AGCATGTGAA TTGGTTAAGC AGCACACCAA AAAGTGCACC
AAGTATCATT TCTTAGCTGA GCGAGTCGAA ACTGAAGCCG AGTTTGAAGC GACCAAAGAG
GCGGGCTTTA AATTCTTCCA AGGCTACTTT TTCAGTAAGC CCGAAGTGAT GCAGACTAAA
TATGTGAGCA CCGAACAAGT GCTGGCGCTC AAGTTATTTA GAGAAGTGTG CGTGCCTGAT
CCAGACTTTG GCCGGATTGA AAACATCATT ACTCAGGATG TCACGCTGTC GTACAAGTTA
CTGCGTTTTG TGAACACACA ATCGACTACG TTGGAAGTGA CCATCACGTC ATTCCGCCAA
GCCTTGATTT ACCTTGGGCA AGAAAAGCTC AAAATGTTTG TCTCGCTGGT GGTGGCGTCT
TATATCTCCA GTAGCAAGCC ACGTGAGTTG TACAACTTAT CTCTGCAACG CGCTCAATTC
TGTGAAGCCA TGTCGCGCTA TCAACCTTTT GCCCATCTCA ACGAGCAGGG TTTTATGGTT
GGCTTGTTGT CGATTCTCGA TGCCATGCTC GATTTGTCTG TCGAATCTTT AGTTGGACAA
TTACCGTTAA GTCCTTCCGT GCAGCAAGCC TTGTTGCATC GCCAAGGTGA ATACGGCGCG
TTACTGGCAA TCGAAGAGTG CTACGAGCGT GCCGATTGGG CGGGCGTGGA GCAATTCTCT
CAGCAGCTCG GGCTTTCTGT CGACGATGTG AAGTCTGAGC TTGGCGAAGC CGTTCGCTGG
AGCCAGACCT TTTCTGGCGC CTAA
|
|---|
| Protein sequence | MKNAYVARQP IFNRKRQTLG YELLFRDGES NAYPAHIDSN RATYRLIVEN FLSVGTNPLI
ASSRCFINFP QQSLLRRLPR SLPKNKIVVE VLETCQPTDE LLEAIRELYR EGYLIALDDF
TLTDEWRRFL PYVHIVKLDI MAMGLEKACE LVKQHTKKCT KYHFLAERVE TEAEFEATKE
AGFKFFQGYF FSKPEVMQTK YVSTEQVLAL KLFREVCVPD PDFGRIENII TQDVTLSYKL
LRFVNTQSTT LEVTITSFRQ ALIYLGQEKL KMFVSLVVAS YISSSKPREL YNLSLQRAQF
CEAMSRYQPF AHLNEQGFMV GLLSILDAML DLSVESLVGQ LPLSPSVQQA LLHRQGEYGA
LLAIEECYER ADWAGVEQFS QQLGLSVDDV KSELGEAVRW SQTFSGA
|
|---|
| |