Gene VIBHAR_00296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00296 
Symbol 
ID5555060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp284107 
End bp285108 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content47% 
IMG OID640905791 
Productglyceraldehyde-3-phosphate dehydrogenase 
Protein accessionYP_001443551 
Protein GI156972644 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATTA AAGTAGGTAT TAACGGTTTC GGTCGTATTG GTCGCTTGGC ATTACGCGCA 
GCGTTTGATT GGCCAGAGCT AGAGTTCGTA CACATCAACG ATGTAGCGGG TGATGCAGCG 
ACTCTGGGTC ACTTACTTGA GTTCGATTCA GTTCAAGGTC GTTGGAACCA TGCAGTGCAA 
GTTGAAGGCA CAGATATGAT GATCAACGGT AAGCGCATTA CGACTTCACA AGAGCGTGAT 
ATTGATGCTG TGAACTGGGG TCAATGTGAT GTTGTGATTG AAGCAACGGG CGTTCATCGC 
AAAACCTCAT TCCTAAACAA ATACCTAGAA CAAGGCGTAA AACGTGTTGT TGTTAGCGCA 
CCAGTAAAAG AAGACGGCGT AGCTAACATC GTAGTGGGTG TGAACGACCA CATTTTCGAC 
CCAGCGCAGC ACCGCATCGT AACCGCTGCG TCTTGTACAA CCAACTGTAT TGCACCAGTA 
GTGAAAGTGA TTCACGAGAA ACTGGGCATT GAACAATCGT CATTCACAAC GATTCACGAT 
TTAACTAACA CACAAATGAT TTTGGATGCG CCGCACAAAG ATCTACGTCG TGCACGTGCA 
TGTGGCATGA GCCTGATCCC AACCACAACG GGCAGTGCGA CTGCAATTGT GGAAATCTTC 
CCGGACCTAA AAGACAAGAT TAACGGCCAC GCGGTTCGTG TTCCTCTAGC AAACGCATCG 
CTGACAGACA TCATTTTTGA TGTGAAACGT GATACCACGG CAGAAGAGGT TAACGCACTA 
CTGAAAGAAG CTTCTGAAGG CGAGCTAAAA GGCATCCTTG GCTTTGAAGA GCGTCCATTG 
GTTTCTATCG ATTACAAAGG CGACCAACGT TCAACTATCG TTGATGCGCA ATCAACCATG 
GTAGTGGGTT CTCGCATGGT GAAGATTTAC GCTTGGTACG ATAACGAAAT GGGTTACGCG 
ACGCGTACTG CAGAATTGGT TCGTAACGTT GGTATGGCAT AA
 
Protein sequence
MTIKVGINGF GRIGRLALRA AFDWPELEFV HINDVAGDAA TLGHLLEFDS VQGRWNHAVQ 
VEGTDMMING KRITTSQERD IDAVNWGQCD VVIEATGVHR KTSFLNKYLE QGVKRVVVSA 
PVKEDGVANI VVGVNDHIFD PAQHRIVTAA SCTTNCIAPV VKVIHEKLGI EQSSFTTIHD 
LTNTQMILDA PHKDLRRARA CGMSLIPTTT GSATAIVEIF PDLKDKINGH AVRVPLANAS 
LTDIIFDVKR DTTAEEVNAL LKEASEGELK GILGFEERPL VSIDYKGDQR STIVDAQSTM 
VVGSRMVKIY AWYDNEMGYA TRTAELVRNV GMA