Gene VIBHAR_00294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00294 
Symbol 
ID5555039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp282125 
End bp283342 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content49% 
IMG OID640905789 
Productnitric oxide reductase cytochrome b subunit 
Protein accessionYP_001443549 
Protein GI156972642 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCAA AACTAAGCAA AAGTATCCGT CAGTATATGC TGGTGACGTT CAACTATTGG 
AACTTCACTG TGACGGATGG TGCACTCCGT ATGCTGGTGG TGCTTTACTT CCATGACTTA
GGCTACTCAA GCTTAGCCAT TGCTTCGCTG TTCCTTTTCT ATGAATTTTT TGGCGTAGTG
ACCAACTTGG TTGGTGGCTG GCTAGGTGCT CGACTTGGTT TGAACAAAAC CATGAACGTC
GGCTTAGGGA TGCAGATTTT TGCCTTGCTG ATGTTGGCAG TGCCCAATGC TTGGTTGACC
ATCCCTTGGG TAATGGCGGC GCAGGCAATT TCGGGTATTG CCAAAGACTT AAATAAGATG
AGTGCCAAGA GCGCGATCAA AACTTTGGTG CCAGACGAGC AGCAAGGTGC ACTTTATAAG
TGGGTTGCGA TCTTAACGGG CTCGAAGAAT GCGCTGAAAG GTGCGGGCTT CTTCATTGGT
GGTTTGCTGC TATCGGCGTT TGGCTTCCAA ACTTCGATGG TCATCATGGC AAGTGTGCTG
GCTGTTGTGT TTGTATGCAG CTTGATCTGG CTAGAAGCGG ATATGGGTAA GGCGAAGAGC
AAACCTAAGT TCCGTCAAAT TTTCTCCAAG TCAGAATCGG TGAACATTCT TTCCGCTGCA
CGTATGTTCC TATTTGGCGC GCGTGATGTG TGGTTTGTTG TTGCACTGCC GATTTATCTT
GGCAGCGTGT TTGGTTGGGA TCACCTGATG GTAGGCGGCT TCCTTGCGGC TTGGGTGATT
GCTTACGGAT TCGTTCAAGG CTTTGCGCCT CGTATTACCG GCAAAGCGCA AGGTCGAGTG
CCAGATGGCA GTGCGGCTCT GATTTGGGCG GGTATCCTGG CTGTCATCAC TGGTGCGATT
GCTTATGGCG TGCAAATCGG CTGGCAGCCA GAGCTTGTTA TTGTCGTGGG CTTGATGATT
TTCGGTGCTG TGTTTGCGGT GAACTCATCT CTGCACTCTT ACCTGATCGT TAGTTATGCG
AAAGGCGATG GCGTTTCACT GGATGTCGGC TTCTACTATA TGGCGAATGC AATGGGACGT
TTGATTGGTA CGGTGCTATC CGGTTGGATT TACCAAGAAG CGGGTTTAGC GGCATGTCTG
TGGGTGTCAT TTGCTTTCTT AGCGCTAACG ACGGTCATCT CTATCAAGCT ACCAAAAGCC
AAAGTGGCGA CGGCTTAA
 
Protein sequence
MISKLSKSIR QYMLVTFNYW NFTVTDGALR MLVVLYFHDL GYSSLAIASL FLFYEFFGVV 
TNLVGGWLGA RLGLNKTMNV GLGMQIFALL MLAVPNAWLT IPWVMAAQAI SGIAKDLNKM
SAKSAIKTLV PDEQQGALYK WVAILTGSKN ALKGAGFFIG GLLLSAFGFQ TSMVIMASVL
AVVFVCSLIW LEADMGKAKS KPKFRQIFSK SESVNILSAA RMFLFGARDV WFVVALPIYL
GSVFGWDHLM VGGFLAAWVI AYGFVQGFAP RITGKAQGRV PDGSAALIWA GILAVITGAI
AYGVQIGWQP ELVIVVGLMI FGAVFAVNSS LHSYLIVSYA KGDGVSLDVG FYYMANAMGR
LIGTVLSGWI YQEAGLAACL WVSFAFLALT TVISIKLPKA KVATA