Gene VIBHAR_00271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00271 
Symbol 
ID5555085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp264228 
End bp265073 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content47% 
IMG OID640905766 
Productreverse transcriptase 
Protein accessionYP_001443526 
Protein GI156972619 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAAA TCTGCTCCTC AACCAACCTG AATCAAGCTT TACGAAGAGT GAAGAAGAAC 
AAGGGATGTG CAGGTGTCGA CAAACTCGAC ATAGATGCAA CTATCTTTAA GCTTCGACAA
GCTTCAAACG GGCAAGCGCT TCGCCAGAGT CTTCTGGATG GAAGCTACCG ACCTCAACCC
GTTCTTGGTG TGGGAATCCC CAAACCGAGT GGTGGCGTCA GACAACTAGG TATCCCAACA
GTGCTCGATA GAATTGTCCA ACAGGCAATC ACCTCAGTAC TGTCAGATAT CTATGAAGCT
AAGTTCTCCA ATAGCAGTTA CGGATTTAGA CCCAACCGCA GTGCACATCA TGCGCTAGCG
GCAGCCAGTC GCTACATCCG AGAGGGGCGA GGTTATGTAG TAGATATCGA CCTAGCGAAA
TACTTCGATA CCGTTAATCA CGATAGACTG ATGCACAGAT TGTCAGAGGA TATCGCGGAT
AAACGAGTGT TGAAGCTCAT CAGGTCATAT CTACAGGCAG GCATAATGCG AAACGGTTTA
GTCGAACAGA GACAACGAGG GACACCACAG GGTGGTCCAT TATCTCCGTT GCTATCCAAT
ATCGTATTAG ATGAACTGGA TAAAGAGCTA GAGCGTAGAG GGCATAAGTT CTGTCGATAT
GCAGACGACT GTCAAATCTA TGTTGGTAGT GAGGAAGCCG CTTATCGAGT GAAAGAGTCG
ATAACGGAGT ACTTGGAGCA AAAACTGAAA CTCACGGTAA ACCGAGAGAA AAGTGCAGCA
ACAAGAGTGA CAGAGCGAAC TTACCTAAGC CACCGCTTCG GGATAGATGG GACAATCCAT
ATATAG
 
Protein sequence
MEQICSSTNL NQALRRVKKN KGCAGVDKLD IDATIFKLRQ ASNGQALRQS LLDGSYRPQP 
VLGVGIPKPS GGVRQLGIPT VLDRIVQQAI TSVLSDIYEA KFSNSSYGFR PNRSAHHALA
AASRYIREGR GYVVDIDLAK YFDTVNHDRL MHRLSEDIAD KRVLKLIRSY LQAGIMRNGL
VEQRQRGTPQ GGPLSPLLSN IVLDELDKEL ERRGHKFCRY ADDCQIYVGS EEAAYRVKES
ITEYLEQKLK LTVNREKSAA TRVTERTYLS HRFGIDGTIH I