Gene VIBHAR_00262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00262 
Symbol 
ID5555478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp253934 
End bp255043 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content46% 
IMG OID640905757 
ProducttRNA (uracil-5-)-methyltransferase 
Protein accessionYP_001443517 
Protein GI156972610 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 
TIGRFAM ID[TIGR02143] tRNA (uracil-5-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACTC TTGATGTAAA CCCACAGCGC TACCAAGAAC AACTGGCTGA AAAAGTCGAA 
CGTCTGAACG ATATGTTCGC GCCATACAAC GTGCCAGAAC TGGAAGTGTT TGAATCACCA 
GAGCAGCACT ACCGTATGCG TGCTGAGTTC CGCGTTTGGC ATGAGGGTGA AGACCTTTAC 
TACATCATGT TCAACCAAGA AACTCGTGAG AAATACCGCG TTGACCAATT CCCAGCAGCA 
AGCCGTCTGA TCAACGACCT GATGCCACTA TTGGTTGAAG CGATGAAAGA CAACGAATCG 
CTACGTCGTA AACTGTTCCA AGTGGACTTT CTATCAACGC TTAGCGGTGA GATTCTGGTT 
TCACTGCTTT ACCATCGCCA ACTGGATGAA GAGTGGATTG AAAACGCGAA AGCCCTTAAG 
CAGCGTTTGA ATGATGAAGG CTTCAACCTA AACATCATTG GTCGTGCTCG TAAAATGAAG 
ATTGTCTTAG ACCGTGACTA CGTGATCGAG AAGCTAGACG TAAATGGTCA AAGCTACATC 
TACCAACAAG TAGAAAACAG CTTCACTCAA CCAAACGGCA AAGTCGCTGA GAAGATGTTG 
GAATGGGCAG TCGACTGTAC TCAAGAAAGC ACTGGTGATC TCCTAGAGCT ATACTGTGGT 
AACGGTAACT TCTCTTTGGC GTTGGCACAA AACTTCGATC GCGTTCTTGC AACTGAATTA 
GCGAAGCCAT CTGTGGTTTC TGCGCAATAC AACATTGCAG CGAACGAGAT TGATAACGTT 
CAAATCCTAC GTCTATCTGC AGAAGAGTTT ACTCAAGCAA TCGAAGGTAA GCGTGAATTC 
CGCCGCCTAC AAGATGCAGG TGTGGATCTG AAGAGCTACA ACTGCAACAC GATTTTTGTC 
GATCCACCAC GCTCAGGTAT GGATGTCGAC ACTTGTAAGA TGGTGCAAGG TTACGAGCGC 
ATCATGTACA TCTCTTGTAA CCCAGAGACA CTTAAAGAGA ACTTGGACAT TCTATGCGAA 
ACCCACAACG TGACACGTTT TGCTCTGTTT GACCAATTCC CTTACACACA CCACATGGAA 
GCAGGTGTAC TGTTAGAACG CAAAGCGTAA
 
Protein sequence
MATLDVNPQR YQEQLAEKVE RLNDMFAPYN VPELEVFESP EQHYRMRAEF RVWHEGEDLY 
YIMFNQETRE KYRVDQFPAA SRLINDLMPL LVEAMKDNES LRRKLFQVDF LSTLSGEILV 
SLLYHRQLDE EWIENAKALK QRLNDEGFNL NIIGRARKMK IVLDRDYVIE KLDVNGQSYI 
YQQVENSFTQ PNGKVAEKML EWAVDCTQES TGDLLELYCG NGNFSLALAQ NFDRVLATEL 
AKPSVVSAQY NIAANEIDNV QILRLSAEEF TQAIEGKREF RRLQDAGVDL KSYNCNTIFV 
DPPRSGMDVD TCKMVQGYER IMYISCNPET LKENLDILCE THNVTRFALF DQFPYTHHME 
AGVLLERKA