Gene VIBHAR_00255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00255 
Symbol 
ID5555724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp248984 
End bp249664 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content41% 
IMG OID640905751 
ProductRNA binding protein 
Protein accessionYP_001443511 
Protein GI156972604 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAGTA TAGGGAATCC AGAAATGAGC GCAACCCTTT TTTTGAAAAA AACTTACCAA 
GCGGTCACTA ATCCATCAAA TGCGTTATAT CTGCATATTT CTTCGTCACA TTTGAGACAT 
ATCACAGCAA TTGGTTGGAA AAACACCAAC CATATACGTA AGATCCATGT GTCTATTTTG 
TTAATAGGCA GACAATCTCT TTATCATCTA TATGTAGTAA TCAAAATGAC GTCTAAAAAA 
AATCTGACTT TGTGTGCTGG GTTGGCGGTC ATTGGGGGAA TCATCTTCTC TCAGTTACCT 
GTGCCACCTG CCTTGAGCTT TGTTATCGGT GTTATCGCTA CTGCTTTTCT TTTTTCACTT 
TCTAGCAAAA CACCTGTTCT TCAATCTTCG GATTCCGATC CTTCAACTAA AACGCTGTAT 
GTCGGCAACC TTCCTTATAA GGCTAATGAG AGTCACGTTC GTGATTTGTT TGCTGAGTAC 
GGACAGGTTT ACGCGGTACG CTTAATGAAA GATAAGCGTA CAGGTAAAAG AAGAGGGTTT 
GGTTTCGTGG TGATGGCAGC GGCAGATGCA AAACCTGCTA TCGCTAAACT TAATGAGAAG 
GAATATATGG AGCGTACGCT TAAAGTGCGT ATTGCAAACG ACCCTAAACA CCCGGAAGGC 
GGTAAACCTG AACAGGATTA A
 
Protein sequence
MRSIGNPEMS ATLFLKKTYQ AVTNPSNALY LHISSSHLRH ITAIGWKNTN HIRKIHVSIL 
LIGRQSLYHL YVVIKMTSKK NLTLCAGLAV IGGIIFSQLP VPPALSFVIG VIATAFLFSL 
SSKTPVLQSS DSDPSTKTLY VGNLPYKANE SHVRDLFAEY GQVYAVRLMK DKRTGKRRGF 
GFVVMAAADA KPAIAKLNEK EYMERTLKVR IANDPKHPEG GKPEQD