Gene VIBHAR_00240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00240 
Symbol 
ID5556335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp237146 
End bp238111 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content46% 
IMG OID640905736 
Productbiotin--protein ligase 
Protein accessionYP_001443503 
Protein GI156972596 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAGG AACACTCTGT AAAGCTGCAT ATCCTCAAGT CCCTTAGCGA TGGAGGTTTT 
CATTCCGGAG AAGACTTGGG GCAAGAACTT GGGATATCTC GAGCTGCGAT TGCTAAGCAC 
ATTAAAGGGC TTAATGACTG GGGCGTTGAT ATATACCGTA TCCAAGGACG TGGTTATCAG 
TTAGCACAAC CTTTGCAGTT ACTCGACGAA GAGAGACTTC AAGCTCAACT GGATACTCCT 
CTCGAGCTTA TTTCTGTGAT CGACTCTACT AACCAATATC TACTCGATCG AGTCAATGAT 
TCTGTGAAAG GGCGAGTCTG CCTAGCAGAA TATCAGGCGA AGGGGCGAGG GCGACGTGGT 
CGTCAATGGA TATCGCCTTT TGGTACAAAC TTATACTTAT CCATGTACTG GCGTTTGGAT 
GCTGGTATGG CAGCGGCTAT GGGGTTGAGC TTGGTTGTTG GCATTGCCGC TGTGGAAGCT 
ATCGAAGAGT TGGGTATTCA AGGCGTTAAA CTCAAATGGC CGAACGATAT CTACTACCAG 
GATAAAAAGC TCGCGGGTAT CTTAGTGGAA ATGTCTGGGC AAGCAGGCGG TGCAGCGCAT 
CTGGTTATTG GTATGGGGCT TAATATTGGT ATGCCAGACT TGCAGCCGGA CATTGATCAG 
CCTTGGACAA CTTTGAATCA AGTTAGTGAT GGTTTTAGCA TCGACCGAAA TGACCTAGCG 
CTCAAGTTCA TCAAACATTG GAAGATGGCA TTAGAAGAAT ACGAAATGAC GGGATTGGCC 
GGTTTTGTTG AACGTTGGAA TCGTTTAGAT AACTTTATTG GTCGCCCAGT GAAGTTACTA 
ATGGGCCCAA GAGAAGTGCA TGGTGTTGTG AAAGGCATTG ACCAACAAGG CGGTGTTGTT 
CTAGAAACCG AGAATGGATT GGAGACCTAC ATTGGTGGTG AGATCTCCTT AAGAAAAACG 
GAATAG
 
Protein sequence
MRKEHSVKLH ILKSLSDGGF HSGEDLGQEL GISRAAIAKH IKGLNDWGVD IYRIQGRGYQ 
LAQPLQLLDE ERLQAQLDTP LELISVIDST NQYLLDRVND SVKGRVCLAE YQAKGRGRRG 
RQWISPFGTN LYLSMYWRLD AGMAAAMGLS LVVGIAAVEA IEELGIQGVK LKWPNDIYYQ 
DKKLAGILVE MSGQAGGAAH LVIGMGLNIG MPDLQPDIDQ PWTTLNQVSD GFSIDRNDLA 
LKFIKHWKMA LEEYEMTGLA GFVERWNRLD NFIGRPVKLL MGPREVHGVV KGIDQQGGVV 
LETENGLETY IGGEISLRKT E