Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00219 |
Symbol | hemE |
ID | 5554117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 217291 |
End bp | 218358 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640905715 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_001443486 |
Protein GI | 156972579 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAT TAAAAAATGA TCGTTATCTG CGTGCCCTTT TAAAAGAGCC AGTAGATTAC ACGCCAGTAT GGATGATGCG TCAGGCAGGT CGTTACCTAC CAGAATACAA AGCAACTCGT GCGCAAGCGG GCGATTTCAT GTCTTTGTGT AAAAACGCGG AGTTGGCGTC AGAAGTAACG CTTCAACCAC TACGCCGTTT TCCTCTTGAT GCAGCGATCT TGTTCTCTGA CATCCTAACT ATCCCAGATG CAATGGGCTT AGAACTTCGC TTTGCTGCGG GTGAAGGTCC GGTTTTCGAT AAACCAATCA CTTGCAAAGC AGACGTAGAA AAGATCGGTC TGCCGGATCC AGAAGGCGAG CTGCAATACG TAATGAACGC AGTGCGTCAA ATCCGCAAAG ATTTGAACGG TGACGTTCCA CTGATTGGTT TCTCTGGTAG CCCATGGACG CTGGCGACTT ACATGGTTGA AGGCGGCAGC TCGAAAGCGT TCACCAAGAT CAAGAAGATG ATGTACGCAG AACCACAAAC GCTGCACCTA CTTCTAGATA AGTTAGCAGA CAGCGTTATC GAGTACCTAA ACGCGCAAAT TAAAGCGGGT GCACAGTCGG TGATGGTATT TGATACATGG GGCGGTGTAC TGACACCTCG TGACTACAAC CTGTTCTCAC TGCAATACAT GCACAAGATT GTGGATGGTC TGATTCGTGA AAACGACGGT CGTCGCGTAC CAGTAACGCT GTTCACTAAG AACGGTGGCA TGTGGCTTGA GCAAATCGCA GCAACGGGCT GTGATGCGGT AGGTCTAGAC TGGACCATCA ACATCGCAGA CGCAAAAGCG CGTATCGGTG ACAAAGTGGC TCTACAAGGT AACATGGACC CATCAATGCT TTACGCTTCA CCAGAGCGTA TCCGTGAAGA AGTCGCGGGT ATCCTAGAAG GCTTTGGCGA TGCAGGTACT GGTCACGTGT TCAACCTAGG TCACGGCATC CACTTGGATG TGCCGCCAGA AAACGCAGGT GTGTTTGTGG AAGCGGTGCA CGAGCTGTCT AAGCCGTACC ACAAGTAA
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Protein sequence | MTELKNDRYL RALLKEPVDY TPVWMMRQAG RYLPEYKATR AQAGDFMSLC KNAELASEVT LQPLRRFPLD AAILFSDILT IPDAMGLELR FAAGEGPVFD KPITCKADVE KIGLPDPEGE LQYVMNAVRQ IRKDLNGDVP LIGFSGSPWT LATYMVEGGS SKAFTKIKKM MYAEPQTLHL LLDKLADSVI EYLNAQIKAG AQSVMVFDTW GGVLTPRDYN LFSLQYMHKI VDGLIRENDG RRVPVTLFTK NGGMWLEQIA ATGCDAVGLD WTINIADAKA RIGDKVALQG NMDPSMLYAS PERIREEVAG ILEGFGDAGT GHVFNLGHGI HLDVPPENAG VFVEAVHELS KPYHK
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