| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00210 |
|---|
| Symbol | purH |
|---|
| ID | 5553131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 209330 |
|---|
| End bp | 210922 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640905706 |
|---|
| Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| Protein accession | YP_001443477 |
|---|
| Protein GI | 156972570 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
|---|
| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACG CTCGTCCTAT TCGCCGTGCG CTTATCAGCG TATCAGACAA AACAGGTATT
GTTGAGTTTG CACAAGCTCT TGCTGAGCGC GGTGTCGATA TCCTATCTAC TGGTGGTACG
GCTCGTCTAC TTGCAGAACA AGGCATCGCT GTAACAGAAG TCTCTGACTA CACTGGTTTC
CCAGAAATGA TGGACGGTCG CGTTAAAACG CTTCACCCGA AAGTTCACGG TGGTGTGCTG
GGTCGTCGTG GCCAAGATGA TGACGTGATG GAAAAACACG GCATCAACCC TATCGATATG
GTTGTTGTTA ACCTATACCC ATTCGCAGAA ACCGTTGCTA AAGAAGGCTG TACGCTTGCT
GATGCAGTTG AGAACATCGA CATCGGCGGT CCAACAATGG TTCGCTCTGC AGCGAAAAAC
CACAAAGACG TAACTATCGT TGTGAACGCT CACGACTACA ACCGCGTGAT CGCTGAAATG
GACGCGAACG ACAAATCTCT AACACTAGAA ACTCGCTTCG ACCTTGCTAT CGCAGCATTC
GAACACACGG CTTCTTACGA CGGCATGATC GCAAACTACT TCGGCACTAT GGTTCCATCT
TACGGTGAGA ACAAAGAAGG TGACGAAGAG TCGAAATTCC CACGTACTTT CAACCAGCAA
TTCGAGAAGA AGCAAGACAT GCGCTATGGT GAGAACAGCC ACCAAGCCGC CGCATTCTAC
GTAGAAGCAA ACCCACAAGA AGCATCTGTT TCTACTGCTC GCCAAATCCA GGGTAAAGCC
CTTTCTTACA ACAACATCGC AGATACTGAC GCAGCACTTG AATGTGTGAA AGAGTTCAAC
GAGCCAGCAT GTGTGATCGT AAAACACGCG AACCCATGTG GTGTAGCTCT AGGTAAGGAT
ATCCTAGAAG CGTACAACCG CGCTTACCAA ACTGATCCAA CATCTGCATT CGGCGGCATC
ATTGCATTCA ATCAAGAGCT AGATGCTGAA ACAGCAACCG CTATTGTTGA GCGTCAATTC
ATTGAAGTAA TCATCGCACC TTCAGTTTCT GCTGAAGCGA TTGAAGTGGT TGCGGCGAAA
AAGAATGTGC GTCTACTTGA GTGTGGCGAA TGGACAACTA AAACAACTGG CTTTGACGTG
AAACGCGTGA ATGGCGGTCT ACTGGTTCAA GACCGCGACC AAGGCATGGT AAGCCTAGGC
GACCTAAAAG TGGTTTCTAA GCGTCAACCA ACAGAAGAAG AGCTGAAAGA TGCACTGTTC
TGTTGGAAAG TAGCAAAATA CGTGAAATCA AACGCGATTG TTTACGCAAA AGGTGACATG
ACTATCGGTG TAGGTGCTGG CCAAATGAGC CGCGTTTACT CTGCGAAGAT TGCAGGTATC
AAAGCTGCAG ACGAAGGTCT AGAAGTTGCA GGTAGCGTAA TGGCATCTGA CGCATTCTTC
CCATTCCGTG ATGGTATCGA TGCAGCTGCA GAAGCAGGCA TTAAGTGTGT TATCCAACCG
GGTGGCTCTA TGCGTGATGA CGAAGTTATC GCAGCAGCAG ACGAACACGG CATGGCGATG
ATCTTCACTG GTATGCGTCA CTTCCGCCAC TAA
|
|---|
| Protein sequence | MNNARPIRRA LISVSDKTGI VEFAQALAER GVDILSTGGT ARLLAEQGIA VTEVSDYTGF
PEMMDGRVKT LHPKVHGGVL GRRGQDDDVM EKHGINPIDM VVVNLYPFAE TVAKEGCTLA
DAVENIDIGG PTMVRSAAKN HKDVTIVVNA HDYNRVIAEM DANDKSLTLE TRFDLAIAAF
EHTASYDGMI ANYFGTMVPS YGENKEGDEE SKFPRTFNQQ FEKKQDMRYG ENSHQAAAFY
VEANPQEASV STARQIQGKA LSYNNIADTD AALECVKEFN EPACVIVKHA NPCGVALGKD
ILEAYNRAYQ TDPTSAFGGI IAFNQELDAE TATAIVERQF IEVIIAPSVS AEAIEVVAAK
KNVRLLECGE WTTKTTGFDV KRVNGGLLVQ DRDQGMVSLG DLKVVSKRQP TEEELKDALF
CWKVAKYVKS NAIVYAKGDM TIGVGAGQMS RVYSAKIAGI KAADEGLEVA GSVMASDAFF
PFRDGIDAAA EAGIKCVIQP GGSMRDDEVI AAADEHGMAM IFTGMRHFRH
|
|---|
| |