Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00177 |
Symbol | |
ID | 5556475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 180152 |
End bp | 180640 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640905673 |
Product | transposase |
Protein accession | YP_001443452 |
Protein GI | 156972545 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3415] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAGCC TTAATAATAC TGATTTTAAA AAACTAGCAA GCCAACAAAA AACCATTCAA ATGAAGGTTC GCTTGCTAGC CCTTGCCCAC TTCAAAGAAG GTCACTCGCG CACTCAAATT GCCAAATACC TTAAAGTCAG TCGAACTAGT GTAAACAAAT GGGTTCAAAC ATTTCTTGAA GAAGGATTGG AAGGGCTTCA AGAAAAACCT CGCACAGGCA GACCTGCATA TCTCAATGCA GAACAACGAA AACAACTCAG TGCATTCATT AAAAAAGAAG CAGAGTCCCC TTCGGGCGGG CGCCTTGTCG GGAGCGATAT ACATGACTAC ATCGTGAAAA ACTTTGATAA ATACTACCAC CCTAATTCTA TCTATTATCT CCTCGATCAC ATGGGTTTCT CTTGGATAAC TTCTCGCTCC AAACACCCTA AACAATCACA GCAAGTCCAA GACGATTTTA AAAAAATTCA AAATAGAAAC GATCCTTAA
|
Protein sequence | MDSLNNTDFK KLASQQKTIQ MKVRLLALAH FKEGHSRTQI AKYLKVSRTS VNKWVQTFLE EGLEGLQEKP RTGRPAYLNA EQRKQLSAFI KKEAESPSGG RLVGSDIHDY IVKNFDKYYH PNSIYYLLDH MGFSWITSRS KHPKQSQQVQ DDFKKIQNRN DP
|
| |