Gene VIBHAR_00152 details

Gene Information

• Locus tag: VIBHAR_00152
• ID: 5555174
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 151183
• End bp: 151662
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640905648
• Product: RNA methyltransferase
• Protein accession: YP_001443427
• Protein GI: 156972520
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0219] Predicted rRNA methylase (SpoU class)
• TIGRFAM ID: [TIGR00185] rRNA methylase, putative, group 2

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTGATA TCGCTCTATA CGAACCAGAA ATCGCGCCGA ACACCGGCAA CATCATTCGC 
CTGTGTGCTA ACTGTGGTGC GAATCTCCAC CTGATTGAGC CACTCGGTTT TGATCTAGAA 
GAGAAGAAAG TCCGCCGCGC AGGTTTGGAT TACCACGATT TGGCTCGCGT GACGCGTCAT 
AAAGATTATC AAGCATTCTT GGAATACTTA GAGAAAGAGA AACAAGGCAA CTACCGCCTG 
TTTGCATGTA CGACAAAGAC CACAGGTCAT CACGTCGATG CAAAATACCA AGAAGGCGAT 
GTTTTGATGT TTGGTCCAGA AACACGTGGC CTGCCAGCAG ACGTAATTGA TAGCCTGCCA 
ATGGAGCAAC GTATCCGTAT TCCAATGATG CCAGACGCTC GTAGCCTAAA CCTATCTAAC 
GCTGTTGCTA TCATTGCGTT TGAAGCGTGG CGTCAAATGG GTTTTGAAGG CGCAATGTAA 

 

Protein sequence

MFDIALYEPE IAPNTGNIIR LCANCGANLH LIEPLGFDLE EKKVRRAGLD YHDLARVTRH 
KDYQAFLEYL EKEKQGNYRL FACTTKTTGH HVDAKYQEGD VLMFGPETRG LPADVIDSLP 
MEQRIRIPMM PDARSLNLSN AVAIIAFEAW RQMGFEGAM