| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00130 |
|---|
| Symbol | |
|---|
| ID | 5554937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 127536 |
|---|
| End bp | 128507 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640905626 |
|---|
| Product | lysyl-tRNA synthetase |
|---|
| Protein accession | YP_001443405 |
|---|
| Protein GI | 156972498 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
|---|
| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACGA CCTGGCAACC TACCGCTTCT ATGGAACAAC TTCGTCAACG TGCCGCGTTG
ATCACCGCTA TTCGTCAATT CTTTGCCGAG CGACAGGTGA TGGAAGTTGA CACGCCAGCC
ATGAGTCACG CCACGGTGAC CGACATTCAT TTGCATACCT TCCAAACAGA GTTTGTTGGA
CCGGGCTATG CCGATGGCAG CAAACTGTTC TTTATGACCA GCCCTGAATT CCATATGAAG
CGCTTGCTAG CAGCGGGCAG CGGCTGTATC TACCAAATCA ACAAAGCGTT TCGTAACGAA
GAGAATGGTC GTCATCACAA CCCCGAGTTC ACTATGCTGG AGTGGTACCG CATCGGCTTT
GATCACCACA AGCTGATGGA CGAAATGGAC GATCTGCTGC AACTGGTGCT GAAGTGTGGC
GCGGCAGAAC GTATGACTTA CCAGCAAGCT TTTATTGATG TGCTAGGCGT GTGCCCATTA
GAAGGCTCGA TGCAAGAGCT AAAAGTGGTC GCGGCTAAGC TGGGTCTGAG TGACATTGCT
GAGCCAGAAG AGGATCGCGA TACCTTGCTG CAACTACTGT CCAGCATTGG TGTCGAAGCC
AAGATCGGTC AGCAAGTGCC AGCATTTGTT TATGACTTCC CTGCATCGCA GGCGGCGCTG
GCCAAGATCA ACCCGCAAGA CATCCGAGTG GCGGACCGCT TTGAGGTGTA CTTCAAAGGT
ATTGAGTTGG CGAACGGCTT CCACGAGCTG GATAACCCGA AAGAGCAACT GGCGCGTTTT
GAACAAGATA ATGCTAAGCG TTTGGACATG GGGCTGAAGC CACAGCCGAT CGATTACCAC
TTGATTGGCG CATTAGAAGC AGGCTTACCA GATTGTGCCG GTGTGGCGCT CGGCGTTGAT
CGCCTGATCA TGTTGGCATT GGGTTGTGAC CATATTGATC AAGTGACTGC TTTCCCATTC
CCAATTGCTT AA
|
|---|
| Protein sequence | MQTTWQPTAS MEQLRQRAAL ITAIRQFFAE RQVMEVDTPA MSHATVTDIH LHTFQTEFVG
PGYADGSKLF FMTSPEFHMK RLLAAGSGCI YQINKAFRNE ENGRHHNPEF TMLEWYRIGF
DHHKLMDEMD DLLQLVLKCG AAERMTYQQA FIDVLGVCPL EGSMQELKVV AAKLGLSDIA
EPEEDRDTLL QLLSSIGVEA KIGQQVPAFV YDFPASQAAL AKINPQDIRV ADRFEVYFKG
IELANGFHEL DNPKEQLARF EQDNAKRLDM GLKPQPIDYH LIGALEAGLP DCAGVALGVD
RLIMLALGCD HIDQVTAFPF PIA
|
|---|
| |