Gene VIBHAR_00113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00113 
Symbol 
ID5553476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp107991 
End bp109109 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content47% 
IMG OID640905609 
Productribosome-associated GTPase 
Protein accessionYP_001443388 
Protein GI156972481 
COG category[R] General function prediction only 
COG ID[COG1162] Predicted GTPases 
TIGRFAM ID[TIGR00157] ribosome small subunit-dependent GTPase A 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCCGAA AGCGTGCTCA ATCAACTGAG TTAACTCACA TTAAGTACAA GATTGTGGCA 
AAAAAGAAAA AGTTAACCAA AGGTCAGGTG CGCCGCGTAC GCAGCAACCA ACAAAAACGC 
CTAAAAAAGC AAGAAGAGTC CATCCAGTGG GATGAAACCA TGCTAGGCGC AAGTAAACAG 
GGTCTCGTCA TCACTCGTTT CGGTCAGCAC GCTGACATCG AAGATCTAGA AACAGGTGAG 
GTGCAGCGCT GTAACCTTCG TCGTGGTATC GAATCACTGG TATCCGGCGA TCGCGTACTT 
TGGCGTGAAG GACTTGAATC AATGGCAGGT ATTTCTGGCG TGGTTGAAGC CGTAGAACCT 
CGCACATCGA TGCTAACTCG TCCTGACTAC TACGATGGCT TGAAACCTGT CGCCGCTAAC 
ATCGACCAAA TGGTGATCGT GTCTTCGGTT TTGCCCGAGC TTTCACTCAA CATCATCGAC 
CGCTACCTAG TGGCGTCCGA AACACTGAAC ATTGCCCCGC TATTGGTACT CAACAAAATC 
GACTTGCTTG CTGATGAAGA TCGAGCAATG TACGAAGAGT GGCTAGAAGA ATACAAACGT 
ATCGGCTACA AAGTACTGTT TGTAAGTAAA CAATCAAGCG AGGGCATTGC AGAACTTGAA 
GAGCAATTGC GTGATCGTAT CAATATTTTC GTTGGTCAAT CTGGCGTAGG TAAATCGAGC 
CTAGTAAACG CACTGATGCC TGAACTTGAG CAGGAAGTGG AAGAAGGCGA GATCTCAGAG 
AACTCTGGTT TGGGTCAGCA TACAACCACA GCCGCTCGCT TGTACCACAT CCCAACTGGT 
GGCGATCTGA TTGACTCTCC AGGAGTACGT GAATTTGGTT TGTGGCACTT AGAAGCAGAA 
GAAGTGACCA AAGCGTTCGT TGAATTCCGC CCTTATCTTG GTGGTTGTAA GTTCCGCGAC 
TGTAAACACA ATGATGATCC TGGCTGCATC TTGCGTGAAG CAGTAGAGAA AGGCGAAATT 
AGTGAAGTGC GTTTTGAAAA CTACCATCGA ATTCTAGAAA GCATGGTAGA AAACAAAGCC 
AACCGTCAGT ACTCACGTAA CAAGAAAACG GATCTTTAA
 
Protein sequence
MSRKRAQSTE LTHIKYKIVA KKKKLTKGQV RRVRSNQQKR LKKQEESIQW DETMLGASKQ 
GLVITRFGQH ADIEDLETGE VQRCNLRRGI ESLVSGDRVL WREGLESMAG ISGVVEAVEP 
RTSMLTRPDY YDGLKPVAAN IDQMVIVSSV LPELSLNIID RYLVASETLN IAPLLVLNKI 
DLLADEDRAM YEEWLEEYKR IGYKVLFVSK QSSEGIAELE EQLRDRINIF VGQSGVGKSS 
LVNALMPELE QEVEEGEISE NSGLGQHTTT AARLYHIPTG GDLIDSPGVR EFGLWHLEAE 
EVTKAFVEFR PYLGGCKFRD CKHNDDPGCI LREAVEKGEI SEVRFENYHR ILESMVENKA 
NRQYSRNKKT DL