Gene VIBHAR_00097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00097 
Symbol 
ID5555778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp101625 
End bp103355 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content48% 
IMG OID640905593 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001443384 
Protein GI156972477 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAGTC TTTCAAAATT TAGAGTAGTG GCGGCATTTG TCGCCACTTT TCTCCTTATC 
ATCCCCAATT TAGCATTTGC TAACGTCGTA AAAAGTTTCC GAGTTTGGCC TTCACCTGAT
GAGACTCGTG TCGTCATCGA CCTGAATGCG GAAGCTGACT ATTCCTATTT CTCTTTATCT
AGCCCGGATC GCTTAGTGGT GGATCTCAAA AACACCTCTA TGCAAGCTAA GTTACCTGTT
ACGGTAACCG ACAGTCCTGT GTTAAAGCGC GTTCGTAAGA GTTCGCCGCC GAACAAAGGC
ACATTCCGTT TGGTGTTCGA GCTGAAGAAG AATGTGAAAG CGGAGCTATT CACGCTTAAA
CCAACACCTG CTGGACAATA TGGCCACCGT TTAGTGATCG ATTTGCCGCA TGGTGCAAAG
AAATCCACAC CAGCAACCAG TGCGACTAAA CCGAGTAAGC CTACGACACC GAGCAAAGAC
ATGAGCACGG TGCAACGTGC ACAAGAAATT CTTATTGTGA TTGACCCAGG CCACGGTGGC
GAAGACCCAG GCTCGATTGG ACCATCACGC CGTAAATACG AAAAAGACGC GGTACTGAGC
ATTTCTCGCA AGCTTTCTGC TCAATTAAAT GCAGTACCGG GGATCAAAAC ACGAATGACG
CGCAGCGGTG ACTACTTTGT TAACCTTAAC CGACGCGTTG CAATTGCTCG TGAGAACAAT
GCACACTTAT TGATTTCAAT CCACGCTGAT GCGTTTACTT CACCAAAGCC GCGCGGTGGT
TCGGTGTTCG TGTTGAACAC GCGTCGTGCA AACACTGAAA TTTCACGTTG GGTCGAAAAC
CACGAGAGAC AATCTGAATT GCTCGGCGGA TCGGGTACGG CGTTTGTGAG TAATTCAAAT
GACCGCAACG TCAACCAAAC CTTATTAGAT CTTCAGTTCA GCCATTCGCA GAAGGAAGGC
TATAAATTAG CGACAAACAT TCTAGGTGAG ATGGGCAAAG TGGCTCGTCT ACACAACTCG
AAACCAATCA ATACCAGCTT GGCAGTTTTG CGCTCTCCGC AGATTCCGTC TGTGTTGGTT
GAAACGGGCT TTATCTCAAA CCCAACGGAA GAGAAGCTGC TGTTCCAGCG CTCTCACCAA
GACAAGTTAG CGCGAGCGAT CACTAAAGCG GTAGTGCAAT ACCTGAAAGA TAACCCGCCA
GAAGGTACGG TGTTCTCGTC TTCTTCTAAG CCTTCGGTTC ACACAGTGAA GCGTGGTGAG
TCGTTGTCTG TGATTGCTCA GAAATACGGT ACGTCGACCA AAGCAATCAT GAGCGCGAAC
AAGCTTAAAT CAAGCGGTTT GGCGGTTGGT CAGAAGTTGA AAATTCCTGG TACTGGCGCT
GCTTCTGTTT CTGTACCGAA TACCCCAAAT ACCGTTGAGA CCGAGACGAT CACACATACT
GTTAAGTCTG GTGAGTTCCT CGGTAAGATC GCTAGCCATT ACAAGGTGAA GATTGCGGAT
ATTCGTCGCG AGAACAATCT GAAATCAGAC ACAGTTTGGG TTGGTCAGAA ATTGAAGATC
ACGGTCGCAG TGAAGGACAA ACCAATCCGC AAGCACAAGG TTGCTCGTGG TGAATACCTA
GGTAAGATTG CATCGAAATA CGGCGTGAGT GTTTCCAGCA TCCGCAAAGC GAATAACCTG
CGTTCTGATG AACTCGCCGT GGGACAGGTG CTGATCATTC CAAATAAATA A
 
Protein sequence
MLSLSKFRVV AAFVATFLLI IPNLAFANVV KSFRVWPSPD ETRVVIDLNA EADYSYFSLS 
SPDRLVVDLK NTSMQAKLPV TVTDSPVLKR VRKSSPPNKG TFRLVFELKK NVKAELFTLK
PTPAGQYGHR LVIDLPHGAK KSTPATSATK PSKPTTPSKD MSTVQRAQEI LIVIDPGHGG
EDPGSIGPSR RKYEKDAVLS ISRKLSAQLN AVPGIKTRMT RSGDYFVNLN RRVAIARENN
AHLLISIHAD AFTSPKPRGG SVFVLNTRRA NTEISRWVEN HERQSELLGG SGTAFVSNSN
DRNVNQTLLD LQFSHSQKEG YKLATNILGE MGKVARLHNS KPINTSLAVL RSPQIPSVLV
ETGFISNPTE EKLLFQRSHQ DKLARAITKA VVQYLKDNPP EGTVFSSSSK PSVHTVKRGE
SLSVIAQKYG TSTKAIMSAN KLKSSGLAVG QKLKIPGTGA ASVSVPNTPN TVETETITHT
VKSGEFLGKI ASHYKVKIAD IRRENNLKSD TVWVGQKLKI TVAVKDKPIR KHKVARGEYL
GKIASKYGVS VSSIRKANNL RSDELAVGQV LIIPNK