Gene VIBHAR_00094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00094 
Symbolhfq 
ID5555703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp98174 
End bp98437 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content47% 
IMG OID640905590 
ProductRNA-binding protein Hfq 
Protein accessionYP_001443381 
Protein GI156972474 
COG category[R] General function prediction only 
COG ID[COG1923] Uncharacterized host factor I protein 
TIGRFAM ID[TIGR02383] RNA chaperone Hfq 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAGG GGCAATCTCT ACAAGACCCA TTCCTAAATG CGCTACGTCG TGAGCGTATC 
CCGGTATCTA TCTACCTTGT GAACGGTATC AAACTGCAAG GTCAGATCGA ATCTTTCGAT
CAGTTCGTGA TCCTATTGAA GAACACTGTT AACCAAATGG TGTACAAGCA CGCAATCTCT
ACCGTTGTTC CGGCTCGTCC AGTGAGCCAC CACAGTGGTG ATCGTCCTCA AGGTGACCGT
CCACAAGAGA AATCTGAAGA TTAA
 
Protein sequence
MAKGQSLQDP FLNALRRERI PVSIYLVNGI KLQGQIESFD QFVILLKNTV NQMVYKHAIS 
TVVPARPVSH HSGDRPQGDR PQEKSED