Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00094 |
Symbol | hfq |
ID | 5555703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 98174 |
End bp | 98437 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640905590 |
Product | RNA-binding protein Hfq |
Protein accession | YP_001443381 |
Protein GI | 156972474 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAGG GGCAATCTCT ACAAGACCCA TTCCTAAATG CGCTACGTCG TGAGCGTATC CCGGTATCTA TCTACCTTGT GAACGGTATC AAACTGCAAG GTCAGATCGA ATCTTTCGAT CAGTTCGTGA TCCTATTGAA GAACACTGTT AACCAAATGG TGTACAAGCA CGCAATCTCT ACCGTTGTTC CGGCTCGTCC AGTGAGCCAC CACAGTGGTG ATCGTCCTCA AGGTGACCGT CCACAAGAGA AATCTGAAGA TTAA
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Protein sequence | MAKGQSLQDP FLNALRRERI PVSIYLVNGI KLQGQIESFD QFVILLKNTV NQMVYKHAIS TVVPARPVSH HSGDRPQGDR PQEKSED
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