Gene VIBHAR_00093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00093 
Symbol 
ID5555694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp96846 
End bp98135 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content48% 
IMG OID640905589 
Productputative GTPase HflX 
Protein accessionYP_001443380 
Protein GI156972473 
COG category[R] General function prediction only 
COG ID[COG2262] GTPases 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR03156] GTP-binding protein HflX 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTTGACC GTTATGAATC CGGTGAGCGA GCCGTACTTG TTCATATCAA CTTCACGCAA 
GAAGGTGAAT GGGAAGACTT GGCTGAATTC GAAATGCTGG TATCTTCCGC TGGGGTAGAG
GCGCTGCAAG TTGTGACTGG CAGTCGTCAA TCCCCACACC CGAAATACTA TGTCGGAGAG
GGTAAGGCGC AAGAAATTGC TACTGCGGTA CAATTAACTG GTGCTGAAAT TGTGATTTTT
AATCACTCCC TCTCTCCTGC CCAAGAACGT AACCTCGAAG CACTGTGCAA ATGTCGAGTC
CTCGACCGCA CCGGTCTCAT CCTCGATATC TTTGCTCAAC GAGCACGAAC ACACGAAGGT
AAGCTGCAAG TCGAGCTAGC CCAACTTCGT CATATTTCTA CTCGTTTAAT TCGCGGTTGG
ACGCACCTTG AAAGGCAGAA AGGCGGCATC GGTCTACGTG GGCCAGGTGA AACCCAGTTA
GAAACCGACC GTCGTTTATT GCGTGACAGA ATTAAAGCTA TCCTTCGTCG TCTTGAAAAA
GTCGCGAAGC AGCGTGAACA AGGGCGTCGT GCCCGAAACC GAGCTGAAAT CCCAACGGTT
TCTCTCGTGG GCTACACCAA CGCGGGTAAG TCTACACTCT TCAACCGTAT TACAGAAGCT
GGCGTTTACG CGGCAGATCA ACTGTTTGCT ACTCTTGACC CAACTTTACG TAAGATAGAG
TTAGCAGATG TAGGGCCTGC AATACTTGCA GATACCGTTG GTTTTATCCG ACACCTACCT
CACGATTTGG TTGCAGCCTT CAAAGCGACC TTGCAGGAAA CGCAAGAAGC TGACATTTTG
TTACATGTTG TTGATGCCAG TGACGAGCGT TTTCGTGAGA ATATTCAAGC TGTTCATGAA
GTCTTAGAAG AGATCGACGC ACATGAAGTG CCGACACTCG TAGTAATGAA CAAGATTGAC
AATCTAGAAG AACAGAAACC ACGTATAGAA CGTGATGAGG AAGGCGTGCC TCGTACGGTC
TGGGTTTCCG CGATGGACGG ATTAGGCATT GATCTTCTGT TTGACGCGCT GACCGAGCGT
TTAGCGTCGC AAATGGTTGA GCATCAGTTG CGAATTCCTC CACAGTATCA AGGACGATTC
CGTAGTACAT TCTTCCAAAT GAAGTGTATT CAACGTGAGG AATATGACCA GGAAGGTAAC
TTGTTGATCA ATATTCGAAT GCAACAGGTA GATTGGTCTA GACTTGAAAA AAGAGAAGGG
GCAGTTTTAG TCGACTTTAT AGTCACTTAA
 
Protein sequence
MFDRYESGER AVLVHINFTQ EGEWEDLAEF EMLVSSAGVE ALQVVTGSRQ SPHPKYYVGE 
GKAQEIATAV QLTGAEIVIF NHSLSPAQER NLEALCKCRV LDRTGLILDI FAQRARTHEG
KLQVELAQLR HISTRLIRGW THLERQKGGI GLRGPGETQL ETDRRLLRDR IKAILRRLEK
VAKQREQGRR ARNRAEIPTV SLVGYTNAGK STLFNRITEA GVYAADQLFA TLDPTLRKIE
LADVGPAILA DTVGFIRHLP HDLVAAFKAT LQETQEADIL LHVVDASDER FRENIQAVHE
VLEEIDAHEV PTLVVMNKID NLEEQKPRIE RDEEGVPRTV WVSAMDGLGI DLLFDALTER
LASQMVEHQL RIPPQYQGRF RSTFFQMKCI QREEYDQEGN LLINIRMQQV DWSRLEKREG
AVLVDFIVT