Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00092 |
Symbol | |
ID | 5555725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 95595 |
End bp | 96800 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640905588 |
Product | serine protease |
Protein accession | YP_001443379 |
Protein GI | 156972472 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGTGGA ATGAGCCTGG AAATAACAAC GGCAACAATG GCCGCGATAA TGACCCTTGG GGTAATAATA ATCGTGGTGG CCAGCGTCCT GGTGGCCGAG ATCAAGGTCC GCCAGATTTA GATGAAGTGT TCAGCAAACT GAGTCAAAAG CTGGGGGGCA AATTTGGTAA AAAAGGCGGC GGCGGTGGTT CACCTATCGG CGGTGGCGGT AGTGCGATTG GCTTTGGTGT CATTGCAGTT ATCGCGATTG CGGTGTGGTT CTTCGCTGGC TTTTACACCA TCGGTGAAGC AGAGCGCGGT GTCGTGCTGC GTTTAGGTAA ATACGACCGT ATCGTGGACC CAGGTCTGAA CTGGCGTCCT CGTTTTATCG ACGAATACGA AGCGGTTAAC GTGCAAGCGA TTCGTTCGCT ACGTGCATCA GGTCTAATGC TGACTAAAGA TGAAAACGTA GTAACGGTAG CGATGGACGT TCAATATCGT GTTGCTGACC CATACAAATA TCTATATCGC GTAACCAATG CGGATGACAG CTTGCGTCAA GCAACGGATT CTGCGTTACG TGCGGTAATT GGTGACTCAC TGATGGATAG CATCCTAACA AGTGGTCGTC AGCAAATCCG TCAAACGACA CAAGAAACGC TGAACCAAAT CATCGATAGC TACGATATGG GCATCGTGAT TGTTGACGTG AACTTTCAGT CTGCGCGTCC GCCAGAGCAA GTGAAAGATG CGTTTGATGA TGCAATCGCA GCACGTGAGG ATGAAGAGCG TTTCATCCGT GAAGCAGAAG CTTACAAGAA CGAAATCTTG CCTAAAGCAA CTGGTCGTGC AGAGCGTTTG AAGAAAGAAG CGCAAGGTTA CAACGAGCGT GTAACTAACG AAGCACTTGG TCAAGTAGCT CAGTTTGAAA AACTACTACC TGAATACCAA GCGGCACCGG GTGTAACTCG TGACCGTCTG TACCTAGACA CTATGGAAGA GGTTTACTCA AGCACATCGA AAGTGCTGAT TGACTCTGAA TCTAGCGGCA ACCTTCTTTA CCTTCCAATT GATAAATTGG CTGGTAAAGA TGGTCAAACA GACACTAAAC GTAAATCGAA ATCGACTTCA ACGTACGATC ATATCCAATT GGAATCTGAG CGTTCGCAAG AAGACACTTC GAACACGCAG TCTCGTTCAA CTGGTACACG TCAAGGGAGA TACTAA
|
Protein sequence | MAWNEPGNNN GNNGRDNDPW GNNNRGGQRP GGRDQGPPDL DEVFSKLSQK LGGKFGKKGG GGGSPIGGGG SAIGFGVIAV IAIAVWFFAG FYTIGEAERG VVLRLGKYDR IVDPGLNWRP RFIDEYEAVN VQAIRSLRAS GLMLTKDENV VTVAMDVQYR VADPYKYLYR VTNADDSLRQ ATDSALRAVI GDSLMDSILT SGRQQIRQTT QETLNQIIDS YDMGIVIVDV NFQSARPPEQ VKDAFDDAIA AREDEERFIR EAEAYKNEIL PKATGRAERL KKEAQGYNER VTNEALGQVA QFEKLLPEYQ AAPGVTRDRL YLDTMEEVYS STSKVLIDSE SSGNLLYLPI DKLAGKDGQT DTKRKSKSTS TYDHIQLESE RSQEDTSNTQ SRSTGTRQGR Y
|
| |