Gene VIBHAR_00092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00092 
Symbol 
ID5555725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp95595 
End bp96800 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content48% 
IMG OID640905588 
Productserine protease 
Protein accessionYP_001443379 
Protein GI156972472 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01933] HflK protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTGGA ATGAGCCTGG AAATAACAAC GGCAACAATG GCCGCGATAA TGACCCTTGG 
GGTAATAATA ATCGTGGTGG CCAGCGTCCT GGTGGCCGAG ATCAAGGTCC GCCAGATTTA
GATGAAGTGT TCAGCAAACT GAGTCAAAAG CTGGGGGGCA AATTTGGTAA AAAAGGCGGC
GGCGGTGGTT CACCTATCGG CGGTGGCGGT AGTGCGATTG GCTTTGGTGT CATTGCAGTT
ATCGCGATTG CGGTGTGGTT CTTCGCTGGC TTTTACACCA TCGGTGAAGC AGAGCGCGGT
GTCGTGCTGC GTTTAGGTAA ATACGACCGT ATCGTGGACC CAGGTCTGAA CTGGCGTCCT
CGTTTTATCG ACGAATACGA AGCGGTTAAC GTGCAAGCGA TTCGTTCGCT ACGTGCATCA
GGTCTAATGC TGACTAAAGA TGAAAACGTA GTAACGGTAG CGATGGACGT TCAATATCGT
GTTGCTGACC CATACAAATA TCTATATCGC GTAACCAATG CGGATGACAG CTTGCGTCAA
GCAACGGATT CTGCGTTACG TGCGGTAATT GGTGACTCAC TGATGGATAG CATCCTAACA
AGTGGTCGTC AGCAAATCCG TCAAACGACA CAAGAAACGC TGAACCAAAT CATCGATAGC
TACGATATGG GCATCGTGAT TGTTGACGTG AACTTTCAGT CTGCGCGTCC GCCAGAGCAA
GTGAAAGATG CGTTTGATGA TGCAATCGCA GCACGTGAGG ATGAAGAGCG TTTCATCCGT
GAAGCAGAAG CTTACAAGAA CGAAATCTTG CCTAAAGCAA CTGGTCGTGC AGAGCGTTTG
AAGAAAGAAG CGCAAGGTTA CAACGAGCGT GTAACTAACG AAGCACTTGG TCAAGTAGCT
CAGTTTGAAA AACTACTACC TGAATACCAA GCGGCACCGG GTGTAACTCG TGACCGTCTG
TACCTAGACA CTATGGAAGA GGTTTACTCA AGCACATCGA AAGTGCTGAT TGACTCTGAA
TCTAGCGGCA ACCTTCTTTA CCTTCCAATT GATAAATTGG CTGGTAAAGA TGGTCAAACA
GACACTAAAC GTAAATCGAA ATCGACTTCA ACGTACGATC ATATCCAATT GGAATCTGAG
CGTTCGCAAG AAGACACTTC GAACACGCAG TCTCGTTCAA CTGGTACACG TCAAGGGAGA
TACTAA
 
Protein sequence
MAWNEPGNNN GNNGRDNDPW GNNNRGGQRP GGRDQGPPDL DEVFSKLSQK LGGKFGKKGG 
GGGSPIGGGG SAIGFGVIAV IAIAVWFFAG FYTIGEAERG VVLRLGKYDR IVDPGLNWRP
RFIDEYEAVN VQAIRSLRAS GLMLTKDENV VTVAMDVQYR VADPYKYLYR VTNADDSLRQ
ATDSALRAVI GDSLMDSILT SGRQQIRQTT QETLNQIIDS YDMGIVIVDV NFQSARPPEQ
VKDAFDDAIA AREDEERFIR EAEAYKNEIL PKATGRAERL KKEAQGYNER VTNEALGQVA
QFEKLLPEYQ AAPGVTRDRL YLDTMEEVYS STSKVLIDSE SSGNLLYLPI DKLAGKDGQT
DTKRKSKSTS TYDHIQLESE RSQEDTSNTQ SRSTGTRQGR Y