Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00070 |
Symbol | |
ID | 5555021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 69186 |
End bp | 71105 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640905566 |
Product | ABC transporter, ATP-binding subunit |
Protein accession | YP_001443357 |
Protein GI | 156972450 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTACCT TCTCTGATAT TCAGTTACTG CGTGGCGGTA AACCTCTTTT AGACCAAGCA TCTGCAACCA TTCACCCGGG TGACAAAGTG GGTCTGGTTG GTAAAAACGG CTGTGGTAAA TCAACTCTGT TTGCCCTACT AAAAGATGAA CTGTCGATTG ATGCAGGCTC ATTTAGCCAA CCTCAACATT GGGAATTGGC TTGGGTTGCA CAGGAAACGC CAGCACTCGA CCGTAGCGCA CTGGAATACG TCATTGATGG TGATCGTGAG TTCCGCAATC TTGAAGCTCA ACTGGCTGTC GCCGAAGAGA AAGACAACGG CACCCTAGTT GCGGAGATCC ATGGCAAGAT TGAAACCATT GGCGGTTACA GCATTCGCGC ACGTGCTGCC GAGCTGCTTG ATGGTCTGGG CTTTAGCCAG GAGCAAATGA GCTGGAACCT GACTCAGTTC TCGGGTGGTT GGCGTATGCG CCTTAACTTG GCTCAAGCGT TGTTGTGTCG TTCTGATCTA TTGTTACTCG ACGAACCAAC CAACCACTTG GATTTGGACG CAGTAATGTG GCTAGAGCGC TGGCTACAAA ACTACCCTGG CACACTGATT CTGATCTCGC ACGACCGTGA TTTCTTGGAT CCGATCGTTG GTCGCATCAT TCACATCGAG AACCAGCAGT TGAACGAATA CACGGGTAAC TACTCGTCAT TCGAAAACCA ACGCGCACAA AAGATGGTGC TGCAACAAGC GATGTTCGAG AAGCAACAGA AGCAGATGTC GCACATGCAA AGCTACATTG ACCGCTTCCG TTACAAAGCA TCAAAAGCGC GCCAAGCACA AAGCCGTATT AAAGCGCTGG AGCGTATGGA GAAGGTACTG CCAGCGCAGT TCGATAACCC ATTTAGTTTC CAGTTCCGCG ATCCTGCAGC GCTACCAAAC CCAATCATGA TGATGGATGA AGTCTCAGCA GGCTACGGTG ACAACCTGAT CCTAGAGAAG ATCCGCCTTA ACCTAGTGCC GGGTAGCCGT ATTGGCCTAC TTGGTCGTAA CGGCGCAGGT AAATCAACCT TGATCAAATT GCTGTCTGGT GAGCTAAAAG CGCAAGGCGG CGATCTAACT TACTCGCAAG GCGTGAAGAT CGGTTACTTC GCTCAGCACC AACTAGAAAC ACTGCACCCA GAAGAAACAC CGCTTCAACA CATGATGCAA ATCGCGCCGG ATCAAACCGA GCAGCAACTA CGTGATTACC TAGGTAGCTT TGGTTTCCAA GGTGATAAAG CGCTTGAGAA AGTTGCACCG TTTTCTGGTG GTGAGAAAGC ACGTTTGGTA TTGGCATTAA TTGTGTGGCA GAAACCGAAC CTGTTGCTAC TCGATGAACC GACCAACCAC TTGGATTTGG ACATGCGCCA AGCATTGACC ATGGCACTGC AAACATTCGA AGGTGCCATG GTGATTGTTT CGCACGACCG CTACCTATTG CGTGCAACCA CAGATGATTT GTACCTTGTG CACGATCGCC AAGTCGCACC ATTCGACGGC GACTTGAACG ATTACTACAA GTGGTTGACC GAGCAACAAA AAGCCGAGCG TAAAGAAGCA CAAGCAGCTC AGCCAGTGAA AGATAACGCC AACAGTGCAG CGGCGAAAAA AGAGCAAAAG CGACGCGAAG CAGAATTTCG TAAGCAGACC GCACCAATTC GCAAAACGCT GACACAGTTG GAAAACAAAA TGGATAAGTT AGGCGAAGCA CTGGCGAAAG CAGAAGAACA GTTATCGGAT AACTCTCTGT ATGAAGCCGA AAACAAAGCT AAACTTAACG AAGTGTTGGC GCTTCAAGCT TCTAGCAAAG CAGATCTTGA AGAAGTAGAA ATGGAATGGA TGTCTGCCCA AGAAACACTT GAGCAGATGG AACTAGAGTT TAATCAATGA
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Protein sequence | MITFSDIQLL RGGKPLLDQA SATIHPGDKV GLVGKNGCGK STLFALLKDE LSIDAGSFSQ PQHWELAWVA QETPALDRSA LEYVIDGDRE FRNLEAQLAV AEEKDNGTLV AEIHGKIETI GGYSIRARAA ELLDGLGFSQ EQMSWNLTQF SGGWRMRLNL AQALLCRSDL LLLDEPTNHL DLDAVMWLER WLQNYPGTLI LISHDRDFLD PIVGRIIHIE NQQLNEYTGN YSSFENQRAQ KMVLQQAMFE KQQKQMSHMQ SYIDRFRYKA SKARQAQSRI KALERMEKVL PAQFDNPFSF QFRDPAALPN PIMMMDEVSA GYGDNLILEK IRLNLVPGSR IGLLGRNGAG KSTLIKLLSG ELKAQGGDLT YSQGVKIGYF AQHQLETLHP EETPLQHMMQ IAPDQTEQQL RDYLGSFGFQ GDKALEKVAP FSGGEKARLV LALIVWQKPN LLLLDEPTNH LDLDMRQALT MALQTFEGAM VIVSHDRYLL RATTDDLYLV HDRQVAPFDG DLNDYYKWLT EQQKAERKEA QAAQPVKDNA NSAAAKKEQK RREAEFRKQT APIRKTLTQL ENKMDKLGEA LAKAEEQLSD NSLYEAENKA KLNEVLALQA SSKADLEEVE MEWMSAQETL EQMELEFNQ
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